F6CKT7 (F6CKT7_DESK7) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Alanine racemase RuleBase RU000608
EC=5.1.1.1 RuleBase RU000608

Gene names

Ordered Locus Names:

Desku_1293

Organism

Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) [Complete proteome] [HAMAP] EMBL AEG14876.1

Taxonomic identifier

760568 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Clostridiales › Peptococcaceae › Desulfotomaculum › Desulfotomaculum kuznetsovii

Protein attributes

Sequence length	379 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622
Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622
Pathway	Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. RuleBase RU004247 SAAS SAAS020622
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS020622 RuleBase RU000608
Molecular function	Isomerase RuleBase RU000608 SAAS SAAS020622 EMBL AEG14876.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	D-alanine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-UniPathway
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F6CKT7 [UniParc]. Last modified July 27, 2011. Version 1. Checksum: DB23E04E25293590	FASTA	379	40,992
	10 20 30 40 50 60 MITESCSNGR PVWVEVNLGA VARNVREIRK LLQPGTKLMA VVKADAYGHG ALPVARAALA 70 80 90 100 110 120 NGAECLAVAI LDEALALRRG GITAPILILG YTPPEQASFL VEYDLTQTVF SLDAVQAISA 130 140 150 160 170 180 AAAAAGKTAR VHIKVDTGMG RIGVFPSEAP DFAEAVSRLP NIFIEGVYTH MACADEQDKA 190 200 210 220 230 240 YTRWQFDRFK EAVAGIEARG VAIPLKHVAN SATTLDLPEM HLDMVRTGII LYGLWPSPDV 250 260 270 280 290 300 RRVIDLKPAM QLKTRVAYVK QVPAGTSISY GRTFTTTGPS VIATLPLGYA DGWSRLLSNK 310 320 330 340 350 360 AEVLIHGQRA PLVGRVCMDQ CMVDVTRIPG VRPGDEVVLF GVQGEQFLPV EEVASHMGTI 370 NYEMVCLISK RVPRIYLND

References

[1]

"Complete sequence of Desulfotomaculum kuznetsovii DSM 6115." Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Lu M., Saunders E., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Nazina T. , Ivanova A., Parshina S., Kuever J., Muyzer G., Plugge C., Stams A., Woyke T. Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 6115 / VKM B-1805 / 17.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002770 Genomic DNA. Translation: AEG14876.1.
RefSeq	YP_004516677.1. NC_015573.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEG14876; AEG14876; Desku_1293.
GeneID	10665172.
KEGG	dku:Desku_1293.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01775.
Enzyme and pathway databases
BioCyc	DKUZ760568:GHV4-1323-MONOMER.
UniPathway	UPA00042; UER00497.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
PROSITE	PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F6CKT7_DESK7

Accession

Primary (citable) accession number: F6CKT7

Entry history

Integrated into UniProtKB/TrEMBL:	July 27, 2011
Last sequence update:	July 27, 2011
Last modified:	April 3, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)