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F6CKT7 (F6CKT7_DESK7) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length379 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201 RuleBase RU004247 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201 RuleBase RU004247

Sequence similarities

Belongs to the alanine racemase family. HAMAP-Rule MF_01201

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site431Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2701Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1411Substrate By similarity HAMAP-Rule MF_01201
Binding site3181Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue431N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
F6CKT7 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: DB23E04E25293590

FASTA37940,992
        10         20         30         40         50         60 
MITESCSNGR PVWVEVNLGA VARNVREIRK LLQPGTKLMA VVKADAYGHG ALPVARAALA 

        70         80         90        100        110        120 
NGAECLAVAI LDEALALRRG GITAPILILG YTPPEQASFL VEYDLTQTVF SLDAVQAISA 

       130        140        150        160        170        180 
AAAAAGKTAR VHIKVDTGMG RIGVFPSEAP DFAEAVSRLP NIFIEGVYTH MACADEQDKA 

       190        200        210        220        230        240 
YTRWQFDRFK EAVAGIEARG VAIPLKHVAN SATTLDLPEM HLDMVRTGII LYGLWPSPDV 

       250        260        270        280        290        300 
RRVIDLKPAM QLKTRVAYVK QVPAGTSISY GRTFTTTGPS VIATLPLGYA DGWSRLLSNK 

       310        320        330        340        350        360 
AEVLIHGQRA PLVGRVCMDQ CMVDVTRIPG VRPGDEVVLF GVQGEQFLPV EEVASHMGTI 

       370 
NYEMVCLISK RVPRIYLND 

« Hide

References

[1]"Complete sequence of Desulfotomaculum kuznetsovii DSM 6115."
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Lu M., Saunders E., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Nazina T. expand/collapse author list , Ivanova A., Parshina S., Kuever J., Muyzer G., Plugge C., Stams A., Woyke T.
Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 6115 / VKM B-1805 / 17.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002770 Genomic DNA. Translation: AEG14876.1.
RefSeqYP_004516677.1. NC_015573.1.

3D structure databases

ProteinModelPortalF6CKT7.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEG14876; AEG14876; Desku_1293.
GeneID10665172.
KEGGdku:Desku_1293.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01775.
OMAEVIRVGT.

Enzyme and pathway databases

BioCycDKUZ760568:GHV4-1323-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF6CKT7_DESK7
AccessionPrimary (citable) accession number: F6CKT7
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: July 9, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)