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F6CIP6 (F6CIP6_DESK7) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Desku_0983 EMBL AEG14578.1
OrganismDesulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) [Complete proteome] [HAMAP] EMBL AEG14578.1
Taxonomic identifier760568 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesPeptococcaceaeDesulfotomaculum

Protein attributes

Sequence length318 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AEG14578.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F6CIP6 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: D65E25930E6CB4BD

FASTA31835,831
        10         20         30         40         50         60 
MEGQVSLPLL KPMLATSSRP FDSPDFLYEV KWDGYRVLAY LDGDTLLRSR NLRDITATFP 

        70         80         90        100        110        120 
ELDELHKCVK NQPAIVDGEI VIFQDGRPSF AALQARGRLE DPLKIKSMVR RYPAILMAFD 

       130        140        150        160        170        180 
VLYAGGRSLL NEPLRRRKEI LTEMINPGDQ VLVSEFVLHQ GRAFADACAA WGLEGAMAKH 

       190        200        210        220        230        240 
LDSPYLPGQR SPYWRKFRHT KEADLVICGY QEGLGRRRLG ALVLGGYRSG ELVYQGKVGT 

       250        260        270        280        290        300 
GFSREEEERL LELLSRLVIP RPVLALPPVE ARRTIAVEPV LVCAVEYLSL TAGGLLRHCS 

       310 
YRGLRPDKSP RECHFLLK 

« Hide

References

[1]"Complete sequence of Desulfotomaculum kuznetsovii DSM 6115."
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Lu M., Saunders E., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Nazina T. expand/collapse author list , Ivanova A., Parshina S., Kuever J., Muyzer G., Plugge C., Stams A., Woyke T.
Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 6115 / VKM B-1805 / 17.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002770 Genomic DNA. Translation: AEG14578.1.
RefSeqYP_004516379.1. NC_015573.1.

3D structure databases

ProteinModelPortalF6CIP6.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEG14578; AEG14578; Desku_0983.
GeneID10664856.
KEGGdku:Desku_0983.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.
OMAVEVKYGQ.

Enzyme and pathway databases

BioCycDKUZ760568:GHV4-1007-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF6CIP6_DESK7
AccessionPrimary (citable) accession number: F6CIP6
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: April 16, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)