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F6C680 (F6C680_BIFBA) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:HMPREF9228_0182 EMBL AEF27628.1
OrganismBifidobacterium breve (strain ACS-071-V-Sch8b) [Complete proteome] [HAMAP] EMBL AEF27628.1
Taxonomic identifier866777 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeBifidobacterium

Protein attributes

Sequence length763 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionexo-alpha-sialidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F6C680 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: 31A3EA1F88AF4B31

FASTA76383,041
        10         20         30         40         50         60 
MSHIPNQIHQ TWNSALLPEQ GGTLHAAFHV ATDGMLLEAR NAERVALAVT VSRGSLVVEA 

        70         80         90        100        110        120 
PEDHIVLDVE DTYGVQFGGV HDLHITFGDF GTRIYLDGYQ AFACATNICP SKYAQAGVFH 

       130        140        150        160        170        180 
CANEAHIGVE RLECFSEAWT SERIQGSVPV PQPDIEFAAA YLADKDVKTL HGVTDGTIYA 

       190        200        210        220        230        240 
QFRVRGVGQF GTILAARDDD RQIMNVDIDD DGFVYRAFVK GQWCEYRAHG DWNDGGWHDL 

       250        260        270        280        290        300 
VIRAFRGAVD IYVDGNMETH QPGQVFFGDL EGLSYVSIGE DTAGVRLCGE VRGGGLFLYP 

       310        320        330        340        350        360 
LGEGQIRKIS DVPPTTDTAL FDKGYEGSAS YRIPSLVTTP SGVTIAGADQ RVVISNDAPN 

       370        380        390        400        410        420 
EIHFVVRRSL DSGQTWLPLQ TVIAFPGDGL DGASVIDSCI VCDRETGRVT VVIDHFPGGR 

       430        440        450        460        470        480 
GFANVEKGLG LDARGRLILH DGEGAEYLLQ PDGAVTSLDG EATSYRVDED GNVTRDGESA 

       490        500        510        520        530        540 
GNIYLKEGVD PHESLLAART SYLVEVHSDD DGETWSKPRH INHMVKEGWM GFLGTSPGNG 

       550        560        570        580        590        600 
IQLSAGKHRG RLLIPYYCTG TSPKFNAGGA LISDDGGQAW RRGKAINEGR VVNGKVVDER 

       610        620        630        640        650        660 
DVRDDDATTH ESVFVERANG DVLCLFRNQH HLGRVGKAVS HDGGDTWETV EFDPDLPDIF 

       670        680        690        700        710        720 
SQPNAVTVPS KAGEEPGCAS DRIVFANASL MRPYRGCGVL RLSEDGGRTW ARNRCFNPYH 

       730        740        750        760 
YVYQCMSVLP DGAIGLSWER ETAGVYFTHL PLSWFGVKSA AEE 

« Hide

References

[1]"Complete sequence of Bifidobacterium breves ACS-071-V-Sch8b."
Durkin A.S., Kim M., Radune D., Hostetler J., Torralba M., Gillis M., Methe B., Sutton G., Nelson K.E.
Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ACS-071-V-Sch8b.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002743 Genomic DNA. Translation: AEF27628.1.
RefSeqYP_005582105.1. NC_017218.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEF27628; AEF27628; HMPREF9228_0182.
GeneID12168840.
KEGGbbv:HMPREF9228_0182.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01186.
OMAIFSQPNA.
OrthoDBEOG61CM2G.

Enzyme and pathway databases

BioCycBBRE866777:GL99-181-MONOMER.

Family and domain databases

Gene3D2.120.10.10. 2 hits.
2.60.120.200. 1 hit.
InterProIPR008985. ConA-like_lec_gl_sf.
IPR013320. ConA-like_subgrp.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERPTHR10628. PTHR10628. 1 hit.
SUPFAMSSF49899. SSF49899. 1 hit.
SSF50939. SSF50939. 2 hits.
ProtoNetSearch...

Entry information

Entry nameF6C680_BIFBA
AccessionPrimary (citable) accession number: F6C680
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: April 16, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)