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F6C622

- F6C622_BIFBA

UniProt

F6C622 - F6C622_BIFBA

Protein
Submitted name:

Alpha amylase, catalytic domain protein

Gene

HMPREF9228_0117

Organism
Bifidobacterium breve (strain ACS-071-V-Sch8b)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 16 (01 Oct 2014)
      Sequence version 1 (27 Jul 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. catalytic activity Source: InterPro
    2. cation binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Enzyme and pathway databases

    BioCyciBBRE866777:GL99-117-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha amylase, catalytic domain proteinImported
    Gene namesi
    Ordered Locus Names:HMPREF9228_0117Imported
    OrganismiBifidobacterium breve (strain ACS-071-V-Sch8b)Imported
    Taxonomic identifieri866777 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeBifidobacterium
    ProteomesiUP000008279: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK05343.
    OMAiYIINFFK.
    OrthoDBiEOG6BKJ6N.

    Family and domain databases

    Gene3Di3.20.20.80. 3 hits.
    InterProiIPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 2 hits.
    [Graphical view]
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    F6C622-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSGRVRHAEA SPRPSWLSSA RFYEVYPQSF ADSNGDGIGD LRGLTERLGY    50
    IHDLGCNALW INPCFDSPFK DAGYDVRDYT KVAPRYGTND DLTALFEHAH 100
    TLGMHVLLDL VPGHTSEEHP WFQASSRPDP TERVTPVDAD RTIPVESVTP 150
    VGQTTPRIAS LFDPRRRGSD CETIRRVVQE SDTQESVSDR YIWTDSWISR 200
    GDGLPFIGGE TERDGTYIIN FFKCQPALNY GFAHPKHPWQ KPALGPEALA 250
    TCEAMLDVMR FWLSRGADGF RVDMADSLVK HDDDGKPFTI RTWQYIFSRI 300
    RPEFPEAAFV AEWGRPYESM QAGFDMDFYL DWRWDGHPNG YNMLLRNTDT 350
    PLDHESDASY FNADSGTSIA PFLEQYLPQL HDCERASGTF NLITCNHDTL 400
    RVAQRLTERE LKVAYGMLLT MPGCPFLYYG DEIGMRYRPL PTKEGGYVRT 450
    GSRTPMQWDA DKPNLGFSCA PSESLYLPVD SAADAPTVAS EAAREDSLFN 500
    WVREVLALRT EQPALASDAR FDVVAAPVDG RAFAYIRTPA DGHASTHPRT 550
    TADSSSAPAP AATRDDVSDR NGATARPLLI AMNPGRGIET VELPSELRPD 600
    ASMLLALGSP TVSGRTLTLP AQSFAILG 628
    Length:628
    Mass (Da):69,812
    Last modified:July 27, 2011 - v1
    Checksum:iA8ACE09A5BFE9109
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002743 Genomic DNA. Translation: AEF26705.1.
    RefSeqiYP_005582047.1. NC_017218.1.

    Genome annotation databases

    EnsemblBacteriaiAEF26705; AEF26705; HMPREF9228_0117.
    GeneIDi12168776.
    KEGGibbv:HMPREF9228_0117.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002743 Genomic DNA. Translation: AEF26705.1 .
    RefSeqi YP_005582047.1. NC_017218.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEF26705 ; AEF26705 ; HMPREF9228_0117 .
    GeneIDi 12168776.
    KEGGi bbv:HMPREF9228_0117.

    Phylogenomic databases

    KOi K05343.
    OMAi YIINFFK.
    OrthoDBi EOG6BKJ6N.

    Enzyme and pathway databases

    BioCyci BBRE866777:GL99-117-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.80. 3 hits.
    InterProi IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 2 hits.
    [Graphical view ]
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Bifidobacterium breves ACS-071-V-Sch8b."
      Durkin A.S., Kim M., Radune D., Hostetler J., Torralba M., Gillis M., Methe B., Sutton G., Nelson K.E.
      Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ACS-071-V-Sch8bImported.

    Entry informationi

    Entry nameiF6C622_BIFBA
    AccessioniPrimary (citable) accession number: F6C622
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 27, 2011
    Last sequence update: July 27, 2011
    Last modified: October 1, 2014
    This is version 16 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3