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F6C622

- F6C622_BIFBA

UniProt

F6C622 - F6C622_BIFBA

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Protein
Submitted name: Alpha amylase, catalytic domain protein
Gene
HMPREF9228_0117
Organism
Bifidobacterium breve (strain ACS-071-V-Sch8b)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciBBRE866777:GL99-117-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase, catalytic domain proteinImported
Gene namesi
Ordered Locus Names:HMPREF9228_0117Imported
OrganismiBifidobacterium breve (strain ACS-071-V-Sch8b)Imported
Taxonomic identifieri866777 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeBifidobacterium
ProteomesiUP000008279: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK05343.
OMAiYIINFFK.
OrthoDBiEOG6BKJ6N.

Family and domain databases

Gene3Di3.20.20.80. 3 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 2 hits.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

F6C622-1 [UniParc]FASTAAdd to Basket

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MSGRVRHAEA SPRPSWLSSA RFYEVYPQSF ADSNGDGIGD LRGLTERLGY    50
IHDLGCNALW INPCFDSPFK DAGYDVRDYT KVAPRYGTND DLTALFEHAH 100
TLGMHVLLDL VPGHTSEEHP WFQASSRPDP TERVTPVDAD RTIPVESVTP 150
VGQTTPRIAS LFDPRRRGSD CETIRRVVQE SDTQESVSDR YIWTDSWISR 200
GDGLPFIGGE TERDGTYIIN FFKCQPALNY GFAHPKHPWQ KPALGPEALA 250
TCEAMLDVMR FWLSRGADGF RVDMADSLVK HDDDGKPFTI RTWQYIFSRI 300
RPEFPEAAFV AEWGRPYESM QAGFDMDFYL DWRWDGHPNG YNMLLRNTDT 350
PLDHESDASY FNADSGTSIA PFLEQYLPQL HDCERASGTF NLITCNHDTL 400
RVAQRLTERE LKVAYGMLLT MPGCPFLYYG DEIGMRYRPL PTKEGGYVRT 450
GSRTPMQWDA DKPNLGFSCA PSESLYLPVD SAADAPTVAS EAAREDSLFN 500
WVREVLALRT EQPALASDAR FDVVAAPVDG RAFAYIRTPA DGHASTHPRT 550
TADSSSAPAP AATRDDVSDR NGATARPLLI AMNPGRGIET VELPSELRPD 600
ASMLLALGSP TVSGRTLTLP AQSFAILG 628
Length:628
Mass (Da):69,812
Last modified:July 27, 2011 - v1
Checksum:iA8ACE09A5BFE9109
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002743 Genomic DNA. Translation: AEF26705.1.
RefSeqiYP_005582047.1. NC_017218.1.

Genome annotation databases

EnsemblBacteriaiAEF26705; AEF26705; HMPREF9228_0117.
GeneIDi12168776.
KEGGibbv:HMPREF9228_0117.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002743 Genomic DNA. Translation: AEF26705.1 .
RefSeqi YP_005582047.1. NC_017218.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEF26705 ; AEF26705 ; HMPREF9228_0117 .
GeneIDi 12168776.
KEGGi bbv:HMPREF9228_0117.

Phylogenomic databases

KOi K05343.
OMAi YIINFFK.
OrthoDBi EOG6BKJ6N.

Enzyme and pathway databases

BioCyci BBRE866777:GL99-117-MONOMER.

Family and domain databases

Gene3Di 3.20.20.80. 3 hits.
InterProi IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 2 hits.
[Graphical view ]
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 2 hits.
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Bifidobacterium breves ACS-071-V-Sch8b."
    Durkin A.S., Kim M., Radune D., Hostetler J., Torralba M., Gillis M., Methe B., Sutton G., Nelson K.E.
    Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ACS-071-V-Sch8b.

Entry informationi

Entry nameiF6C622_BIFBA
AccessioniPrimary (citable) accession number: F6C622
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: May 14, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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