Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

F6C622

- F6C622_BIFBA

UniProt

F6C622 - F6C622_BIFBA

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

Alpha amylase, catalytic domain protein

Gene

HMPREF9228_0117

Organism
Bifidobacterium breve (strain ACS-071-V-Sch8b)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciBBRE866777:GL99-117-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase, catalytic domain proteinImported
Gene namesi
Ordered Locus Names:HMPREF9228_0117Imported
OrganismiBifidobacterium breve (strain ACS-071-V-Sch8b)Imported
Taxonomic identifieri866777 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeBifidobacterium
ProteomesiUP000008279: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK05343.
OMAiYIINFFK.
OrthoDBiEOG6BKJ6N.

Family and domain databases

Gene3Di3.20.20.80. 3 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 2 hits.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

F6C622-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSGRVRHAEA SPRPSWLSSA RFYEVYPQSF ADSNGDGIGD LRGLTERLGY
60 70 80 90 100
IHDLGCNALW INPCFDSPFK DAGYDVRDYT KVAPRYGTND DLTALFEHAH
110 120 130 140 150
TLGMHVLLDL VPGHTSEEHP WFQASSRPDP TERVTPVDAD RTIPVESVTP
160 170 180 190 200
VGQTTPRIAS LFDPRRRGSD CETIRRVVQE SDTQESVSDR YIWTDSWISR
210 220 230 240 250
GDGLPFIGGE TERDGTYIIN FFKCQPALNY GFAHPKHPWQ KPALGPEALA
260 270 280 290 300
TCEAMLDVMR FWLSRGADGF RVDMADSLVK HDDDGKPFTI RTWQYIFSRI
310 320 330 340 350
RPEFPEAAFV AEWGRPYESM QAGFDMDFYL DWRWDGHPNG YNMLLRNTDT
360 370 380 390 400
PLDHESDASY FNADSGTSIA PFLEQYLPQL HDCERASGTF NLITCNHDTL
410 420 430 440 450
RVAQRLTERE LKVAYGMLLT MPGCPFLYYG DEIGMRYRPL PTKEGGYVRT
460 470 480 490 500
GSRTPMQWDA DKPNLGFSCA PSESLYLPVD SAADAPTVAS EAAREDSLFN
510 520 530 540 550
WVREVLALRT EQPALASDAR FDVVAAPVDG RAFAYIRTPA DGHASTHPRT
560 570 580 590 600
TADSSSAPAP AATRDDVSDR NGATARPLLI AMNPGRGIET VELPSELRPD
610 620
ASMLLALGSP TVSGRTLTLP AQSFAILG
Length:628
Mass (Da):69,812
Last modified:July 27, 2011 - v1
Checksum:iA8ACE09A5BFE9109
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002743 Genomic DNA. Translation: AEF26705.1.
RefSeqiYP_005582047.1. NC_017218.1.

Genome annotation databases

EnsemblBacteriaiAEF26705; AEF26705; HMPREF9228_0117.
GeneIDi12168776.
KEGGibbv:HMPREF9228_0117.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002743 Genomic DNA. Translation: AEF26705.1 .
RefSeqi YP_005582047.1. NC_017218.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEF26705 ; AEF26705 ; HMPREF9228_0117 .
GeneIDi 12168776.
KEGGi bbv:HMPREF9228_0117.

Phylogenomic databases

KOi K05343.
OMAi YIINFFK.
OrthoDBi EOG6BKJ6N.

Enzyme and pathway databases

BioCyci BBRE866777:GL99-117-MONOMER.

Family and domain databases

Gene3Di 3.20.20.80. 3 hits.
InterProi IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 2 hits.
[Graphical view ]
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 2 hits.
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Bifidobacterium breves ACS-071-V-Sch8b."
    Durkin A.S., Kim M., Radune D., Hostetler J., Torralba M., Gillis M., Methe B., Sutton G., Nelson K.E.
    Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ACS-071-V-Sch8bImported.

Entry informationi

Entry nameiF6C622_BIFBA
AccessioniPrimary (citable) accession number: F6C622
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: October 1, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3