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F6C2X2 (F6C2X2_SINMB) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.39 EMBL AEG08564.1
Gene names
Ordered Locus Names:SinmeB_4281 EMBL AEG08564.1
Encoded onPlasmid pSINMEB02 EMBL AEG08564.1
OrganismSinorhizobium meliloti (strain BL225C) [Complete proteome] [HAMAP] EMBL AEG08564.1
Taxonomic identifier698936 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium

Protein attributes

Sequence length418 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
   Molecular functionLyase EMBL AEG08564.1
   Technical termComplete proteome
Plasmid EMBL AEG08564.1
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmagnesium ion binding

Inferred from electronic annotation. Source: InterPro

ribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F6C2X2 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: 1757E4A35319E363

FASTA41844,897
        10         20         30         40         50         60 
MLRITYRIET PGDVEFLAKK IASDQSTGTF VPVPGETEEL KARVAARVLA IRHLEPADRA 

        70         80         90        100        110        120 
SWPDEAGSAT RFNRADAEIA FPLDAVGTDL SALMTIAIGG VYSIKGMTGI RIVDMKLPPE 

       130        140        150        160        170        180 
FAAAHPGPQF GVVGSRRLTG VEGRPIIGTI VKPALGLRPE ETAVLVGELL SSGVDFIKDD 

       190        200        210        220        230        240 
EKLMSPAYSP LSARIAAIMP RILDHEQKTG KKVMYAFGIS HTDPDEMMRN HDLVVAAGGN 

       250        260        270        280        290        300 
AAVVNINSVG MGGVAFLRKR SGLVLHAHRN GWDILTRHGG LGMEFSVWQQ FWRLLGVDQF 

       310        320        330        340        350        360 
QINGIRVKYW EPDESFVKSF EAVSTPLFTK DDCPLPVVGS GQWGGQAPET YARTGHTTDL 

       370        380        390        400        410 
LYLCGGGIVS HPGGPGAGVR AVRQAWEAAV AGIPLADYAR DHPELAQSLE KFADGKGA 

« Hide

References

[1]"Exploring the symbiotic pangenome of the nitrogen-fixing bacterium Sinorhizobium meliloti."
US DOE Joint Genome Institute
Galardini M., Mengoni A., Brilli M., Pini F., Fioravanti A., Lucas S., Lapidus A., Cheng J.F., Goodwin L., Pitluck S., Land M., Hauser L., Woyke T., Mikhailova N., Ivanova N., Daligault H., Bruce D., Detter C. expand/collapse author list , Tapia R., Han C., Teshima H., Mocali S., Bazzicalupo M., Biondi E.G.
BMC Genomics 12:235-235(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BL225C.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002742 Genomic DNA. Translation: AEG08564.1.
RefSeqYP_005716385.1. NC_017323.1.

3D structure databases

ProteinModelPortalF6C2X2.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEG08564; AEG08564; SinmeB_4281.
GeneID12306267.
KEGGsmq:SinmeB_4281.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01601.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF6C2X2_SINMB
AccessionPrimary (citable) accession number: F6C2X2
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: January 22, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)