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F6C0V6

- F6C0V6_SINMB

UniProt

F6C0V6 - F6C0V6_SINMB

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Protein
Submitted name: ATP dependent DNA ligase
Gene
SinmeB_4658
Organism
Sinorhizobium meliloti (strain BL225C)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:SinmeB_4658Imported
Encoded oniPlasmid pSINMEB02Imported
OrganismiSinorhizobium meliloti (strain BL225C)Imported
Taxonomic identifieri698936 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000008709: Plasmid pSINMEB02

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F6C0V6-1 [UniParc]FASTAAdd to Basket

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MASSAHGKPT KKAAPSSAAK KAGGFPLPVS TAPMEARSAT ELPGGDAWQY    50
EPKWDGFRCL AFKSGDEVDI RAKSGKPLGR FFPEIVALLR RLEPDMFVLD 100
GELVIEVDGR LSFDALQMRL HPAASRVQKL SQETPAKLIL FDMLAGTDGT 150
ILTGEPLQTR RACLEAFAKK NAVAGMLESS PFTLDIEEAE RWLTSWEAGA 200
TDGVVAKRRD GVYECGERAM VKVKRLKTAD CVVGGFRYES DSSLVGSLLL 250
GLYDTEGLLN HVGFTATISD KERPALTNQL EALREPPGFT GKAPGGPSRW 300
SSERSGEWEP VRPELVVEVR FDHVSNRRFR HGTKLMRWRP DKDPRQCTYQ 350
QIMPS 355
Length:355
Mass (Da):39,136
Last modified:July 27, 2011 - v1
Checksum:i15E57A2F49A5266C
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002742 Genomic DNA. Translation: AEG08933.1.
RefSeqiYP_005716754.1. NC_017323.1.

Genome annotation databases

EnsemblBacteriaiAEG08933; AEG08933; SinmeB_4658.
GeneIDi12306644.
KEGGismq:SinmeB_4658.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002742 Genomic DNA. Translation: AEG08933.1 .
RefSeqi YP_005716754.1. NC_017323.1.

3D structure databases

ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEG08933 ; AEG08933 ; SinmeB_4658 .
GeneIDi 12306644.
KEGGi smq:SinmeB_4658.

Phylogenomic databases

KOi K01971.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BL225C.

Entry informationi

Entry nameiF6C0V6_SINMB
AccessioniPrimary (citable) accession number: F6C0V6
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: April 16, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, PlasmidImported

External Data

Dasty 3

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