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F6BTY7

- F6BTY7_SINMB

UniProt

F6BTY7 - F6BTY7_SINMB

Protein
Submitted name:

DNA ligase D

Gene

SinmeB_2574

Organism
Sinorhizobium meliloti (strain BL225C)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 18 (01 Oct 2014)
      Sequence version 1 (27 Jul 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro
    3. DNA primase activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligase DImported
    Gene namesi
    Ordered Locus Names:SinmeB_2574Imported
    OrganismiSinorhizobium meliloti (strain BL225C)Imported
    Taxonomic identifieri698936 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
    ProteomesiUP000008709: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliF6BTY7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F6BTY7-1 [UniParc]FASTAAdd to Basket

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    MAARNEPLSE YNRRRDFTRT SEPKGAVARR SGDNRMRFLV QKHAATRLHY    50
    DFRLEWEGVL KSWAVTRGPS LNPEDKRLAV RTEDHPLAYG DFEGTIPKGE 100
    YGGGTVMLWD TGWWEPEDDP SKALKKGKLS FKLHGSRMKG GWALVRMRPR 150
    EGEKRENWLL VKETDDVASD DGESLINENI TSIVTGRTME EIAEGRGEKR 200
    ARVWHSNKSI SANLKAGAIA ENGNAGKRAT RKASGKLPAF KAPQLATLVT 250
    KVPAGDAWLN EAKFDGYRLV CAVGAGTVRC YTRNGLDWTE KFPAIAAALA 300
    ELDCQSALID GEVVALSEGG STFSALQKAL RTGASTRLYA FDLIELDGKD 350
    LSRKPLVERK ERLEALLQTL GATSTVQFSE HVRGNGEHVL SAICKAGQEG 400
    IIAKEADAPY RSGRSRSWLK VKCTKRQEFV IGGYTPSSKK GRAFASLLVG 450
    TFEGGKLIYR GGVGTGFSGK TMEDLAAAFA KRKRDTSPFD SVPRERMRNS 500
    VWLEPDLVAE VDFAEFTADG HVRHGSFEGL REDKEARAVK LETPKPAEAE 550
    PETAKSKSSA RTRKTPPVQG DADVLGIRIS HPDRVLFEGQ GITKIDLARY 600
    YAVVAERMLP FAADHPVSLV RCPQGGERHC FFQKHASDGF PEAIREVPIT 650
    ESSGDTENYM YIHDAKGLVA AVQMGTLEFH IWGSSIDRLE KPDRLVFDLD 700
    PDPSVDFETV KAAALRLRDE LAEIGLKTVP MVTGGKGVHV IVPLRPHAEW 750
    EEAKGFAKAL ARSIAERDPD NFVATMSKAK RKGKIFIDWL RNDRGATAIA 800
    PYSTRARSGG PVATPVGWDE LQGLEAANGF QIPDIIERIE AGTDPWREIG 850
    KISQSLTKKI LNSVE 865
    Length:865
    Mass (Da):95,261
    Last modified:July 27, 2011 - v1
    Checksum:iA1F873AAB0EEAE40
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002740 Genomic DNA. Translation: AEG05471.1.
    RefSeqiYP_005714714.1. NC_017322.1.

    Genome annotation databases

    EnsemblBacteriaiAEG05471; AEG05471; SinmeB_2574.
    GeneIDi12302810.
    KEGGismq:SinmeB_2574.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002740 Genomic DNA. Translation: AEG05471.1 .
    RefSeqi YP_005714714.1. NC_017322.1.

    3D structure databases

    ProteinModelPortali F6BTY7.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEG05471 ; AEG05471 ; SinmeB_2574 .
    GeneIDi 12302810.
    KEGGi smq:SinmeB_2574.

    Phylogenomic databases

    KOi K01971.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BL225CImported.

    Entry informationi

    Entry nameiF6BTY7_SINMB
    AccessioniPrimary (citable) accession number: F6BTY7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 27, 2011
    Last sequence update: July 27, 2011
    Last modified: October 1, 2014
    This is version 18 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3