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F6BTY7

- F6BTY7_SINMB

UniProt

F6BTY7 - F6BTY7_SINMB

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Protein
Submitted name:

DNA ligase D

Gene

SinmeB_2574

Organism
Sinorhizobium meliloti (strain BL225C)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
  3. DNA primase activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase DImported
Gene namesi
Ordered Locus Names:SinmeB_2574Imported
OrganismiSinorhizobium meliloti (strain BL225C)Imported
Taxonomic identifieri698936 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000008709: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF6BTY7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F6BTY7-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAARNEPLSE YNRRRDFTRT SEPKGAVARR SGDNRMRFLV QKHAATRLHY
60 70 80 90 100
DFRLEWEGVL KSWAVTRGPS LNPEDKRLAV RTEDHPLAYG DFEGTIPKGE
110 120 130 140 150
YGGGTVMLWD TGWWEPEDDP SKALKKGKLS FKLHGSRMKG GWALVRMRPR
160 170 180 190 200
EGEKRENWLL VKETDDVASD DGESLINENI TSIVTGRTME EIAEGRGEKR
210 220 230 240 250
ARVWHSNKSI SANLKAGAIA ENGNAGKRAT RKASGKLPAF KAPQLATLVT
260 270 280 290 300
KVPAGDAWLN EAKFDGYRLV CAVGAGTVRC YTRNGLDWTE KFPAIAAALA
310 320 330 340 350
ELDCQSALID GEVVALSEGG STFSALQKAL RTGASTRLYA FDLIELDGKD
360 370 380 390 400
LSRKPLVERK ERLEALLQTL GATSTVQFSE HVRGNGEHVL SAICKAGQEG
410 420 430 440 450
IIAKEADAPY RSGRSRSWLK VKCTKRQEFV IGGYTPSSKK GRAFASLLVG
460 470 480 490 500
TFEGGKLIYR GGVGTGFSGK TMEDLAAAFA KRKRDTSPFD SVPRERMRNS
510 520 530 540 550
VWLEPDLVAE VDFAEFTADG HVRHGSFEGL REDKEARAVK LETPKPAEAE
560 570 580 590 600
PETAKSKSSA RTRKTPPVQG DADVLGIRIS HPDRVLFEGQ GITKIDLARY
610 620 630 640 650
YAVVAERMLP FAADHPVSLV RCPQGGERHC FFQKHASDGF PEAIREVPIT
660 670 680 690 700
ESSGDTENYM YIHDAKGLVA AVQMGTLEFH IWGSSIDRLE KPDRLVFDLD
710 720 730 740 750
PDPSVDFETV KAAALRLRDE LAEIGLKTVP MVTGGKGVHV IVPLRPHAEW
760 770 780 790 800
EEAKGFAKAL ARSIAERDPD NFVATMSKAK RKGKIFIDWL RNDRGATAIA
810 820 830 840 850
PYSTRARSGG PVATPVGWDE LQGLEAANGF QIPDIIERIE AGTDPWREIG
860
KISQSLTKKI LNSVE
Length:865
Mass (Da):95,261
Last modified:July 27, 2011 - v1
Checksum:iA1F873AAB0EEAE40
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002740 Genomic DNA. Translation: AEG05471.1.
RefSeqiYP_005714714.1. NC_017322.1.

Genome annotation databases

EnsemblBacteriaiAEG05471; AEG05471; SinmeB_2574.
GeneIDi12302810.
KEGGismq:SinmeB_2574.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002740 Genomic DNA. Translation: AEG05471.1 .
RefSeqi YP_005714714.1. NC_017322.1.

3D structure databases

ProteinModelPortali F6BTY7.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEG05471 ; AEG05471 ; SinmeB_2574 .
GeneIDi 12302810.
KEGGi smq:SinmeB_2574.

Phylogenomic databases

KOi K01971.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BL225CImported.

Entry informationi

Entry nameiF6BTY7_SINMB
AccessioniPrimary (citable) accession number: F6BTY7
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: October 1, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3