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Protein

Superoxide dismutase [Cu-Zn]

Gene

SinmeB_0719

Organism
Sinorhizobium meliloti (strain BL225C)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Cofactori

Protein has several cofactor binding sites:
  • Cu cationUniRule annotationNote: Binds 1 copper ion per subunit.UniRule annotation
  • Zn2+UniRule annotationNote: Binds 1 zinc ion per subunit.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Keywords - Ligandi

CopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:SinmeB_0719Imported
OrganismiSinorhizobium meliloti (strain BL225C)Imported
Taxonomic identifieri698936 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000008709: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2121 PotentialImportedAdd
BLAST
Chaini22 – 172151 PotentialImportedPRO_5000750014Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliF6BPV9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

Keywords - Domaini

SignalImported

Phylogenomic databases

KOiK04565.
OMAiHEMGICK.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.
PROSITEiPS00332. SOD_CU_ZN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

F6BPV9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MMRTMIAIAC AAGMAGAASA QQSSQTATAE FVGKDGTDIG RATLTAGGKG
60 70 80 90 100
VLIEMEISGL PKDTWVAFHA HEMGRCDPKD GFESAGKHFA GEDENAEHGF
110 120 130 140 150
LASNGPHAGD MPNQYVGADG TLRAQVFNSF VSLDDRATAL RGRALVIHVH
160 170
SDDNRSQPSG DAGDRLACAV VK
Length:172
Mass (Da):17,903
Last modified:July 27, 2011 - v1
Checksum:i837850516D0B8996
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002740 Genomic DNA. Translation: AEG03654.1.
RefSeqiYP_005712897.1. NC_017322.1.

Genome annotation databases

EnsemblBacteriaiAEG03654; AEG03654; SinmeB_0719.
GeneIDi12302202.
KEGGismq:SinmeB_0719.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002740 Genomic DNA. Translation: AEG03654.1.
RefSeqiYP_005712897.1. NC_017322.1.

3D structure databases

ProteinModelPortaliF6BPV9.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEG03654; AEG03654; SinmeB_0719.
GeneIDi12302202.
KEGGismq:SinmeB_0719.

Phylogenomic databases

KOiK04565.
OMAiHEMGICK.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.
PROSITEiPS00332. SOD_CU_ZN_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BL225CImported.

Entry informationi

Entry nameiF6BPV9_SINMB
AccessioniPrimary (citable) accession number: F6BPV9
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: January 7, 2015
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.