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F6BNC3

- F6BNC3_SINMB

UniProt

F6BNC3 - F6BNC3_SINMB

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Protein
Submitted name: ATP dependent DNA ligase
Gene
SinmeB_2737
Organism
Sinorhizobium meliloti (strain BL225C)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:SinmeB_2737Imported
OrganismiSinorhizobium meliloti (strain BL225C)Imported
Taxonomic identifieri698936 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000008709: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF6BNC3.

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F6BNC3-1 [UniParc]FASTAAdd to Basket

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MKAFAELLDR LVLTPQRNAK IRLLVDYFRG APDPSRGYAL AAIAGTLSLN    50
TVKPALIRDL LLERMDDVLF HYSYDYVGDL AETVSLAWEP PPDVALQDIP 100
LGEVVERLQR AGRSEVRSLV RDFLDRLDTS GRFALLKLAT GGLRIGVSAR 150
LAKQALAEMG GKEVSEIETL WHGLEPPYLP LFLWLTGEAE MPVLKTPAVF 200
HSVMLATAVG DGDLDGLDPA DFAAEWKWDG IRVQLANVGG ARRLYSRSGD 250
EISSAFPEII EAADITGVID GELLVGGTMR SNRATGTFAD LQQRLNRKTV 300
SRKLMDEYPA FIRAYDILFS GERDIRPEPF RVRREALSSL IEAASPQHFD 350
LSPLVGFSSW KELDELRSSP PDPVIEGVML KRLDSPYMAG RAKGPWFKWK 400
RAPFNIDAVL MYAQRGHGKR SSYYSDFTFG VWAEGEDGAS LVPVGKAYFG 450
FTDAELEVLD RFVRDNTVER FGPVRAVRAE PDSGFVVEVA FEGLNRSTRH 500
KSGVAMRFPR IARLRPDKLP RDADRLETLQ AMMGTQR 537
Length:537
Mass (Da):59,849
Last modified:July 27, 2011 - v1
Checksum:iBD706BE3A0E12AD5
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002740 Genomic DNA. Translation: AEG05634.1.
RefSeqiYP_005714877.1. NC_017322.1.

Genome annotation databases

EnsemblBacteriaiAEG05634; AEG05634; SinmeB_2737.
GeneIDi12302975.
KEGGismq:SinmeB_2737.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002740 Genomic DNA. Translation: AEG05634.1 .
RefSeqi YP_005714877.1. NC_017322.1.

3D structure databases

ProteinModelPortali F6BNC3.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEG05634 ; AEG05634 ; SinmeB_2737 .
GeneIDi 12302975.
KEGGi smq:SinmeB_2737.

Phylogenomic databases

KOi K01971.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BL225C.

Entry informationi

Entry nameiF6BNC3_SINMB
AccessioniPrimary (citable) accession number: F6BNC3
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: October 16, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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