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F6BMT3

- F6BMT3_SINMB

UniProt

F6BMT3 - F6BMT3_SINMB

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Protein
Submitted name: DNA polymerase LigD, ligase domain protein
Gene
SinmeB_1662
Organism
Sinorhizobium meliloti (strain BL225C)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase LigD, ligase domain proteinImported
Gene namesi
Ordered Locus Names:SinmeB_1662Imported
OrganismiSinorhizobium meliloti (strain BL225C)Imported
Taxonomic identifieri698936 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000008709: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF6BMT3.

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F6BMT3-1 [UniParc]FASTAAdd to Basket

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MARASSKKPR DLPPTDPMPA RVDPCLATLV DKPPKGPDWA YEVKWDGYRI    50
AVHIEPGRVR ILTRGGYDWT ERFPSIVDDA RRLAVKTAIL DGEAVVLDDK 100
GRSDFGMLQR ALGRLPSAVE AGAIVFYAFD LLYLDGRDLR RLPLRERRRL 150
LEPLVACPEG AVRLSEEVQA DGDEFFRVAC AHGIEGIIAK HVEKPYRSGR 200
GEWWQKITCK RRDSFVIVGF EPSTVPGHLG RLLLAARKDG ELVYVGGCGT 250
GWSNQLSREL RKLLEGMATK TPAVSLRRKG AVFVEPVLVA EVEYRAWTDD 300
GKLRHASFKG IRQRADDAVV FEMADNIRSG FDDRIE 336
Length:336
Mass (Da):37,650
Last modified:July 27, 2011 - v1
Checksum:iC810BEA6924EF9EB
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002740 Genomic DNA. Translation: AEG04573.1.
RefSeqiYP_005713816.1. NC_017322.1.

Genome annotation databases

EnsemblBacteriaiAEG04573; AEG04573; SinmeB_1662.
GeneIDi12305380.
KEGGismq:SinmeB_1662.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002740 Genomic DNA. Translation: AEG04573.1 .
RefSeqi YP_005713816.1. NC_017322.1.

3D structure databases

ProteinModelPortali F6BMT3.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEG04573 ; AEG04573 ; SinmeB_1662 .
GeneIDi 12305380.
KEGGi smq:SinmeB_1662.

Phylogenomic databases

KOi K01971.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BL225C.

Entry informationi

Entry nameiF6BMT3_SINMB
AccessioniPrimary (citable) accession number: F6BMT3
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: April 16, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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