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F6BMT3

- F6BMT3_SINMB

UniProt

F6BMT3 - F6BMT3_SINMB

Protein
Submitted name:

DNA polymerase LigD, ligase domain protein

Gene

SinmeB_1662

Organism
Sinorhizobium meliloti (strain BL225C)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 15 (01 Oct 2014)
      Sequence version 1 (27 Jul 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA polymerase LigD, ligase domain proteinImported
    Gene namesi
    Ordered Locus Names:SinmeB_1662Imported
    OrganismiSinorhizobium meliloti (strain BL225C)Imported
    Taxonomic identifieri698936 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
    ProteomesiUP000008709: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliF6BMT3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F6BMT3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MARASSKKPR DLPPTDPMPA RVDPCLATLV DKPPKGPDWA YEVKWDGYRI    50
    AVHIEPGRVR ILTRGGYDWT ERFPSIVDDA RRLAVKTAIL DGEAVVLDDK 100
    GRSDFGMLQR ALGRLPSAVE AGAIVFYAFD LLYLDGRDLR RLPLRERRRL 150
    LEPLVACPEG AVRLSEEVQA DGDEFFRVAC AHGIEGIIAK HVEKPYRSGR 200
    GEWWQKITCK RRDSFVIVGF EPSTVPGHLG RLLLAARKDG ELVYVGGCGT 250
    GWSNQLSREL RKLLEGMATK TPAVSLRRKG AVFVEPVLVA EVEYRAWTDD 300
    GKLRHASFKG IRQRADDAVV FEMADNIRSG FDDRIE 336
    Length:336
    Mass (Da):37,650
    Last modified:July 27, 2011 - v1
    Checksum:iC810BEA6924EF9EB
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002740 Genomic DNA. Translation: AEG04573.1.
    RefSeqiYP_005713816.1. NC_017322.1.

    Genome annotation databases

    EnsemblBacteriaiAEG04573; AEG04573; SinmeB_1662.
    GeneIDi12305380.
    KEGGismq:SinmeB_1662.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002740 Genomic DNA. Translation: AEG04573.1 .
    RefSeqi YP_005713816.1. NC_017322.1.

    3D structure databases

    ProteinModelPortali F6BMT3.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEG04573 ; AEG04573 ; SinmeB_1662 .
    GeneIDi 12305380.
    KEGGi smq:SinmeB_1662.

    Phylogenomic databases

    KOi K01971.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BL225CImported.

    Entry informationi

    Entry nameiF6BMT3_SINMB
    AccessioniPrimary (citable) accession number: F6BMT3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 27, 2011
    Last sequence update: July 27, 2011
    Last modified: October 1, 2014
    This is version 15 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3