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F6BM26 (F6BM26_SINMB) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=2.3.1.12 EMBL AEG04005.1
Gene names
Ordered Locus Names:SinmeB_1077 EMBL AEG04005.1
OrganismSinorhizobium meliloti (strain BL225C) [Complete proteome] [HAMAP] EMBL AEG04005.1
Taxonomic identifier698936 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium

Protein attributes

Sequence length447 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the 2-oxoacid dehydrogenase family. RuleBase RU003423

Contains 1 lipoyl-binding domain.

Sequences

Sequence LengthMass (Da)Tools
F6BM26 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: 48B1CAC4E2FDC2AC

FASTA44746,140
        10         20         30         40         50         60 
MPINITMPAL SPTMEEGNLA KWLVKEGDKV KSGDVIAEIE TDKATMEVEA VDEGTVAKIV 

        70         80         90        100        110        120 
VPAGTEGVKV NALIAVLAAE GEDVATAAKG GNGAAGAVPA PKPKETAETA PAAAPAPAAA 

       130        140        150        160        170        180 
PAPQAAAPAS PAPADGEGKR IFSSPLARRL AKEAGIDLSA IAGSGPHGRV VKKDVETAVS 

       190        200        210        220        230        240 
GGAAKPAGAP AAAPAPATLA KGMSEDAVLK LFEPGSYELV PHDGMRKTIA KRLVESKQTI 

       250        260        270        280        290        300 
PHFYVSVDCE LDALMALRAQ LNAAAPEKDG KPVYKLSVND MVIKALALAL RDVPDANVSW 

       310        320        330        340        350        360 
TDQNMVKHKH ADVGVAVSIP GGLITPIVRQ AELKSLSAIS NEMKDLGKRA KERKLKPEEY 

       370        380        390        400        410        420 
QGGTTAVSNM GMMGVKDFAA VVNPPHATIL AVGAGEDRVV VRNKEMVIAN VMTVTLSTDH 

       430        440 
RCVDGALGAE LLAAFKRYIE NPMGMLV 

« Hide

References

[1]"Exploring the symbiotic pangenome of the nitrogen-fixing bacterium Sinorhizobium meliloti."
US DOE Joint Genome Institute
Galardini M., Mengoni A., Brilli M., Pini F., Fioravanti A., Lucas S., Lapidus A., Cheng J.F., Goodwin L., Pitluck S., Land M., Hauser L., Woyke T., Mikhailova N., Ivanova N., Daligault H., Bruce D., Detter C. expand/collapse author list , Tapia R., Han C., Teshima H., Mocali S., Bazzicalupo M., Biondi E.G.
BMC Genomics 12:235-235(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BL225C.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002740 Genomic DNA. Translation: AEG04005.1.
RefSeqYP_005713248.1. NC_017322.1.

3D structure databases

ProteinModelPortalF6BM26.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEG04005; AEG04005; SinmeB_1077.
GeneID12302569.
KEGGsmq:SinmeB_1077.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00627.

Family and domain databases

Gene3D3.30.559.10. 1 hit.
4.10.320.10. 1 hit.
InterProIPR003016. 2-oxoA_DH_lipoyl-BS.
IPR001078. 2-oxoacid_DH_actylTfrase.
IPR000089. Biotin_lipoyl.
IPR023213. CAT-like_dom.
IPR004167. E3-bd.
IPR006257. LAT1.
IPR011053. Single_hybrid_motif.
[Graphical view]
PfamPF00198. 2-oxoacid_dh. 1 hit.
PF00364. Biotin_lipoyl. 1 hit.
PF02817. E3_binding. 1 hit.
[Graphical view]
SUPFAMSSF47005. SSF47005. 1 hit.
SSF51230. SSF51230. 1 hit.
TIGRFAMsTIGR01349. PDHac_trf_mito. 1 hit.
PROSITEPS50968. BIOTINYL_LIPOYL. 1 hit.
PS00189. LIPOYL. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF6BM26_SINMB
AccessionPrimary (citable) accession number: F6BM26
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: October 16, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)