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F6BK70 (F6BK70_THEXL) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 9. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length786 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the DNA mismatch repair MutS family. HAMAP-Rule MF_00092 RuleBase RU003756

Contains 1 Smr domain. HAMAP-Rule MF_00092 SAAS SAAS005747

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Domain709 – 78476Smr By similarity HAMAP-Rule MF_00092
Nucleotide binding331 – 3388ATP By similarity HAMAP-Rule MF_00092

Sequences

Sequence LengthMass (Da)Tools
F6BK70 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: 2400FF98BAD493ED

FASTA78688,422
        10         20         30         40         50         60 
MDERYFKNLE FDKIINQIVN LCDSEPGKEL ALSIKPYENV EKALEEIEKV NEAVSFISSY 

        70         80         90        100        110        120 
GNISFAFKKL DEILAKAKIK SSLSPGQLLS LSRFLSLAGK VKVYLRNEKE ESSFLYLREY 

       130        140        150        160        170        180 
NMRLTNIKEL YDKIDRAVMS EDELADDASP ALKEIRRQKA QINNKIRDTL NSIIASSPKE 

       190        200        210        220        230        240 
LQDPIITIRN GRYVVPVKQE YRGTFKGLIH DQSSSGATLF IEPMAVVELN NDLRQLEIKE 

       250        260        270        280        290        300 
QHEVERILAE LTEDVGKHVD EINENMVVLK ELDVIFAKAK YSISTDSTKP ILNTKGYVNL 

       310        320        330        340        350        360 
KNARHPLISK DAVVPISIHL GESFNTLVIT GPNTGGKTVT LKTVGLLTLM SMSGLNIPAD 

       370        380        390        400        410        420 
EGSDVAFFDN IFVDIGDEQS IEQSLSTFSA HMTNIVKILN NVTSNSLVLL DELGAGTDPT 

       430        440        450        460        470        480 
EGAALAMSIL DFLHRMNCRT IATTHYSELK QYALKNEGVE NASVEFDVET LKPTYRLTIG 

       490        500        510        520        530        540 
IPGKSNAFEI SKRLGLNDDV IDNAKSYITS EELKFEDILK DLENKRIEAE NAKEEIEALK 

       550        560        570        580        590        600 
NQVESLRQEY EKKIKDTERE REKIIEKARE KAKKILENTK ATADEIIAKL KEAEKSDKKN 

       610        620        630        640        650        660 
KLIEEARLKL KENINEMEES LKKSEIPEYK KVPKDVMPGQ TLYIVPLDQT GIALSEPDKD 

       670        680        690        700        710        720 
GNVKIQAGIL KMNVHISNLR ETESSEEKEM EKGFAKYINE KSTNISTSID LRGKTLEEAS 

       730        740        750        760        770        780 
IEVDKYLDDA YLAGLKQVTV IHGKGTGTLR SGITRLLKMN KHVKSFRLGR YGEGEDGVTI 


VELKEK

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References

[1]"Complete sequence of Thermoanaerobacterium xylanolyticum LX-11."
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Lu M., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Hemme C., Woyke T.
Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002739 Genomic DNA. Translation: AEF17065.1.
RefSeqYP_004470737.1. NC_015555.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEF17065; AEF17065; Thexy_1032.
GeneID10661310.
KEGGtxy:Thexy_1032.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK07456.

Family and domain databases

HAMAPMF_00092. MutS2.
InterProIPR005747. DNA_mismatch_repair_MutS-2.
IPR000432. DNA_mismatch_repair_MutS_C.
IPR007696. DNA_mismatch_repair_MutS_core.
IPR002625. Smr/MutS2_C.
[Graphical view]
PANTHERPTHR11361:SF14. PTHR11361:SF14. 1 hit.
PfamPF05192. MutS_III. 1 hit.
PF00488. MutS_V. 1 hit.
PF01713. Smr. 1 hit.
[Graphical view]
PIRSFPIRSF005814. MutS_YshD. 1 hit.
SMARTSM00534. MUTSac. 1 hit.
SM00533. MUTSd. 1 hit.
SM00463. SMR. 1 hit.
[Graphical view]
SUPFAMSSF48334. DNA_repair_MutS_domIII. 1 hit.
TIGRFAMsTIGR01069. mutS2. 1 hit.
PROSITEPS00486. DNA_MISMATCH_REPAIR_2. 1 hit.
PS50828. SMR. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF6BK70_THEXL
AccessionPrimary (citable) accession number: F6BK70
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: April 3, 2013
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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