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F6BHW1

- F6BHW1_THEXL

UniProt

F6BHW1 - F6BHW1_THEXL

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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Thexy_0579

Organism
Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciTXYL858215:GHCH-616-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Thexy_0579Imported
OrganismiThermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11)Imported
Taxonomic identifieri858215 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaThermoanaerobacteralesThermoanaerobacterales Family III. Incertae SedisThermoanaerobacterium
ProteomesiUP000007239: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF6BHW1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F6BHW1-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MSLMDEKISP MLAISGNVFD DPSWVYEIKW DGSRTIAFLS STTKLQDRRL
60 70 80 90 100
VDISHQFPEL MEVNKCLKSN EAILDGELIV LKDNKPSYRN IMMRKHQQNK
110 120 130 140 150
LKIELLSKYN PAIFITWDVI YVDGKELLNY PLIKRKEILS KIVSEGNLIR
160 170 180 190 200
ISDYIFGQGK TLFAETGKKQ LEGVMAKKAD SKYYLGKRSS LWQKFKHHII
210 220 230 240 250
LNAVILGYKI DKTALVLGLY NEDDKLVHIG NVESGISQKE LSSFLEVAND
260 270 280 290 300
LKVNPEFYGL AINNVQWIMP FIVCKVKFME WSENFKMRAP SFLEFALDVK

PTECRFM
Length:307
Mass (Da):35,477
Last modified:July 27, 2011 - v1
Checksum:i747381AA61B829DF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002739 Genomic DNA. Translation: AEF16630.1.
RefSeqiWP_013787381.1. NC_015555.1.
YP_004470302.1. NC_015555.1.

Genome annotation databases

EnsemblBacteriaiAEF16630; AEF16630; Thexy_0579.
GeneIDi10659622.
KEGGitxy:Thexy_0579.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002739 Genomic DNA. Translation: AEF16630.1 .
RefSeqi WP_013787381.1. NC_015555.1.
YP_004470302.1. NC_015555.1.

3D structure databases

ProteinModelPortali F6BHW1.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEF16630 ; AEF16630 ; Thexy_0579 .
GeneIDi 10659622.
KEGGi txy:Thexy_0579.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci TXYL858215:GHCH-616-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Thermoanaerobacterium xylanolyticum LX-11."
    Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Lu M., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Hemme C., Woyke T.
    Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiF6BHW1_THEXL
AccessioniPrimary (citable) accession number: F6BHW1
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: October 29, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3