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F6BHW1

- F6BHW1_THEXL

UniProt

F6BHW1 - F6BHW1_THEXL

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Thexy_0579

Organism
Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 16 (01 Oct 2014)
      Sequence version 1 (27 Jul 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciTXYL858215:GHCH-616-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Thexy_0579Imported
    OrganismiThermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11)Imported
    Taxonomic identifieri858215 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesClostridiaThermoanaerobacteralesThermoanaerobacterales Family III. Incertae SedisThermoanaerobacterium
    ProteomesiUP000007239: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliF6BHW1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F6BHW1-1 [UniParc]FASTAAdd to Basket

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    MSLMDEKISP MLAISGNVFD DPSWVYEIKW DGSRTIAFLS STTKLQDRRL    50
    VDISHQFPEL MEVNKCLKSN EAILDGELIV LKDNKPSYRN IMMRKHQQNK 100
    LKIELLSKYN PAIFITWDVI YVDGKELLNY PLIKRKEILS KIVSEGNLIR 150
    ISDYIFGQGK TLFAETGKKQ LEGVMAKKAD SKYYLGKRSS LWQKFKHHII 200
    LNAVILGYKI DKTALVLGLY NEDDKLVHIG NVESGISQKE LSSFLEVAND 250
    LKVNPEFYGL AINNVQWIMP FIVCKVKFME WSENFKMRAP SFLEFALDVK 300
    PTECRFM 307
    Length:307
    Mass (Da):35,477
    Last modified:July 27, 2011 - v1
    Checksum:i747381AA61B829DF
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002739 Genomic DNA. Translation: AEF16630.1.
    RefSeqiYP_004470302.1. NC_015555.1.

    Genome annotation databases

    EnsemblBacteriaiAEF16630; AEF16630; Thexy_0579.
    GeneIDi10659622.
    KEGGitxy:Thexy_0579.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002739 Genomic DNA. Translation: AEF16630.1 .
    RefSeqi YP_004470302.1. NC_015555.1.

    3D structure databases

    ProteinModelPortali F6BHW1.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEF16630 ; AEF16630 ; Thexy_0579 .
    GeneIDi 10659622.
    KEGGi txy:Thexy_0579.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci TXYL858215:GHCH-616-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Thermoanaerobacterium xylanolyticum LX-11."
      Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Lu M., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Hemme C., Woyke T.
      Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

    Entry informationi

    Entry nameiF6BHW1_THEXL
    AccessioniPrimary (citable) accession number: F6BHW1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 27, 2011
    Last sequence update: July 27, 2011
    Last modified: October 1, 2014
    This is version 16 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3