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F6BHW1 (F6BHW1_THEXL) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length307 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AEF16630.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F6BHW1 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: 747381AA61B829DF

FASTA30735,477
        10         20         30         40         50         60 
MSLMDEKISP MLAISGNVFD DPSWVYEIKW DGSRTIAFLS STTKLQDRRL VDISHQFPEL 

        70         80         90        100        110        120 
MEVNKCLKSN EAILDGELIV LKDNKPSYRN IMMRKHQQNK LKIELLSKYN PAIFITWDVI 

       130        140        150        160        170        180 
YVDGKELLNY PLIKRKEILS KIVSEGNLIR ISDYIFGQGK TLFAETGKKQ LEGVMAKKAD 

       190        200        210        220        230        240 
SKYYLGKRSS LWQKFKHHII LNAVILGYKI DKTALVLGLY NEDDKLVHIG NVESGISQKE 

       250        260        270        280        290        300 
LSSFLEVAND LKVNPEFYGL AINNVQWIMP FIVCKVKFME WSENFKMRAP SFLEFALDVK 


PTECRFM 

« Hide

References

[1]"Complete sequence of Thermoanaerobacterium xylanolyticum LX-11."
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Lu M., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Hemme C., Woyke T.
Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002739 Genomic DNA. Translation: AEF16630.1.
RefSeqYP_004470302.1. NC_015555.1.

3D structure databases

ProteinModelPortalF6BHW1.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEF16630; AEF16630; Thexy_0579.
GeneID10659622.
KEGGtxy:Thexy_0579.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycTXYL858215:GHCH-616-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF6BHW1_THEXL
AccessionPrimary (citable) accession number: F6BHW1
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: April 16, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)