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F6BG42 (F6BG42_THEXL) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length1182 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Required for chromosome condensation and partitioning By similarity. HAMAP-Rule MF_01894

Subunit structure

Homodimer By similarity. HAMAP-Rule MF_01894

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_01894.

Domain

Contains large globular domains required for ATP hydrolysis at each terminus and a third globular domain forming a flexible hinge near the middle of the molecule. These domains are separated by coiled-coil structures By similarity. HAMAP-Rule MF_01894

Sequence similarities

Belongs to the SMC family. HAMAP-Rule MF_01894

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding32 – 398ATP By similarity HAMAP-Rule MF_01894
Coiled coil169 – 21345 By similarity HAMAP-Rule MF_01894
Coiled coil250 – 499250 By similarity HAMAP-Rule MF_01894
Coiled coil678 – 1028351 By similarity HAMAP-Rule MF_01894

Sequences

Sequence LengthMass (Da)Tools
F6BG42 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: 0C50DE23A8B68BF9

FASTA1,182136,176
        10         20         30         40         50         60 
MFLKKLDIIG FKSFADRVVL NFEKGITAIV GPNGSGKSNI SDAVRLVLGE QSIKSLRGNK 

        70         80         90        100        110        120 
LEDVIFVGTE NRKPLSFAEV TLTLDNSDHM LPLDFTEVVI TRKIFRSGES EFYINKTQCR 

       130        140        150        160        170        180 
LKDVFELFMD TGMGRDGYSI IGQGKIDEIL LSRPEDRRQI FEEASGISKY KYKKEEAQKK 

       190        200        210        220        230        240 
LVVTNENINR INDILLELQN QLEPLHEQKA KAETFLKLQE EKKRIDITIH CHDIEELFKK 

       250        260        270        280        290        300 
LSNFKSDYTV IEKNVLKLKT EIESKKNTLN EAELELESFK KQLDEIKQDY YNSKNEIETL 

       310        320        330        340        350        360 
NGKIELLNEK VKNSEENIDR FKKSLEDSKN KSSLTSKEIG EINDSIKEIE SKKQYFESEL 

       370        380        390        400        410        420 
SNLISRYESI KEESNLKQME VESAKEDMVD ILNEIAENNN ILSKTEVMKN NLSEKLNDLV 

       430        440        450        460        470        480 
KTQNNLLNDI ELKNYEVSKI QNNIESLSSE LVTFNDDKNL TEEKLKSLEN NIKIQNGKYE 

       490        500        510        520        530        540 
KTLNEYNSAI AKLRLLRDMD KEYEGYNHSI KNLMKYIEKN ESLKKNVLGV VGELIDVRSE 

       550        560        570        580        590        600 
YSLAIEIALG SAIQDIITET TESAKDLISV LKKNNFGRAT FLPLDNITYK PFDKSFNRDD 

       610        620        630        640        650        660 
GVIGLASDII DYDKKIEKAI KFILGRVIVT KDLDTAISLS RKFKNQFKIV TLKGEVINPG 

       670        680        690        700        710        720 
GSITGGSVLK SQNILKRKED IKLEDIKCNK LARELKELEK YKDTLTKEME KTREKLDNII 

       730        740        750        760        770        780 
NNINIKAGIL NDLMKNKSSL EMEIEKLSTI IKQSELEEKQ IRDVIKSYDE EINKYKDNIS 

       790        800        810        820        830        840 
QLNQKKACLD KLIRDYKDNK DSNADVLNKL EVEITNLKIE LAKYEQKLMN DVSKLNEKKS 

       850        860        870        880        890        900 
EYSNITGSII EIEKSIDKYE NLKIMYEKDI NRTNEKSEIL NERLKKINEE IHEMERKIDT 

       910        920        930        940        950        960 
KLKNINTDKE ILDKLENEYS KEIENKRLKE LNIQKVEMEI ENIKNKLWED YEITFNNAKA 

       970        980        990       1000       1010       1020 
NLIKENILTL RQQLSKINAS IKELGIVNLN AIEEYKNLKE RYDFLKMQYD DLVEAKNSLN 

      1030       1040       1050       1060       1070       1080 
SIIDDANKII KTKFKDNFNL IESQFKETFK KLFGGGRAEL ILTNPDDLLN TGIEINVQPP 

      1090       1100       1110       1120       1130       1140 
GKKLQNISLL SGGEKALVAI SLLFAMILIR PTPFCILDEI DAALDDANVD RFASYLKDLS 

      1150       1160       1170       1180 
RESQFIVVTH RKGTMSVADT LYGVTMQEKG VSKLLSLKLE SA

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References

[1]"Complete sequence of Thermoanaerobacterium xylanolyticum LX-11."
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Lu M., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Hemme C., Woyke T.
Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002739 Genomic DNA. Translation: AEF17387.1.
RefSeqYP_004471059.1. NC_015555.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEF17387; AEF17387; Thexy_1354.
GeneID10661085.
KEGGtxy:Thexy_1354.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK03529.

Family and domain databases

HAMAPMF_01894. Smc_prok.
InterProIPR003395. RecF/RecN/SMC.
IPR024704. SMC.
IPR010935. SMC_hinge.
IPR011890. SMC_prok.
[Graphical view]
PfamPF06470. SMC_hinge. 1 hit.
PF02463. SMC_N. 1 hit.
[Graphical view]
PIRSFPIRSF005719. SMC. 1 hit.
SMARTSM00968. SMC_hinge. 1 hit.
[Graphical view]
SUPFAMSSF75553. SMC_hinge. 1 hit.
TIGRFAMsTIGR02168. SMC_prok_B. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF6BG42_THEXL
AccessionPrimary (citable) accession number: F6BG42
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: April 3, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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