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F6BEM0 (F6BEM0_METIK) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.39 EMBL AEF96817.1
Gene names
Ordered Locus Names:Metig_1280 EMBL AEF96817.1
OrganismMethanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) [Complete proteome] [HAMAP]
Taxonomic identifier880724 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaMethanococciMethanococcalesMethanocaldococcaceaeMethanotorris

Protein attributes

Sequence length425 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
   Molecular functionLyase EMBL AEF96817.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmagnesium ion binding

Inferred from electronic annotation. Source: InterPro

ribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F6BEM0 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: 15C5FA76C0A0A0EA

FASTA42547,770
        10         20         30         40         50         60 
MDYVDLNYTP SENDLLSCIR VKAKNLMKVA NEIAAESSIG TWTKVQTMKS DVYEKLRPKV 

        70         80         90        100        110        120 
YEIEEIGEEG ESKVGIIKIA YPLDAFEIEN MPGTLAGIAG NIFGMKIVDG LRILDYRFPE 

       130        140        150        160        170        180 
KFVKAYRGPR YGIDGIRKLL KVEERPLLGT IVKPKVGLKT DEFAEVAYNA WIGGCDIVKD 

       190        200        210        220        230        240 
DENLVSQSFN KFEDRIFKVL ELRDKAEEET GEKKIYMPNI TAPYREMIKR AELAEDAGSE 

       250        260        270        280        290        300 
YVMLDVVVLG FSAVQQFREE DFKFVIHAHR AMHAAITRSK DWGITMLTLA KIYRLLGVDQ 

       310        320        330        340        350        360 
LHIGTVVGKM EGERAEVCAI RDEIVLDKVE KDDKNKFFDQ DWFGMNNVFP VASGGVYPKL 

       370        380        390        400        410        420 
VPEIIEILGK DVIIQAGGGI HGHPEGTVKG AIAMRAAIDA VMEGKSLEEK AEEVKELKVA 


LEHWK 

« Hide

References

[1]"Complete sequence of Methanotorris igneus Kol 5."
US DOE Joint Genome Institute
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Chertkov O., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Sieprawska-Lupa M., Whitman W., Woyke T.
Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 5666 / JCM 11834 / Kol 5.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002737 Genomic DNA. Translation: AEF96817.1.
RefSeqYP_004484882.1. NC_015562.1.

3D structure databases

ProteinModelPortalF6BEM0.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEF96817; AEF96817; Metig_1280.
GeneID10644143.
KEGGmig:Metig_1280.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01601.
OMAHRAMHAA.

Enzyme and pathway databases

BioCycMIGN880724:GIW6-1310-MONOMER.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR017712. RuBisCO_III.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
TIGRFAMsTIGR03326. rubisco_III. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF6BEM0_METIK
AccessionPrimary (citable) accession number: F6BEM0
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: January 22, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)