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Protein

DNA helicase

Gene

DelCs14_1281

Organism
Delftia sp. (strain Cs1-4)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Catalytic activityi

ATP + H2O = ADP + phosphate.SAAS annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. ATP-dependent DNA helicase activity Source: InterPro
  3. DNA binding Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

HelicaseSAAS annotationImported, Hydrolase

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciDSP742013:GH2F-1305-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
DNA helicaseSAAS annotation (EC:3.6.4.12SAAS annotation)
Gene namesi
Ordered Locus Names:DelCs14_1281Imported
OrganismiDelftia sp. (strain Cs1-4)Imported
Taxonomic identifieri742013 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeDelftia
ProteomesiUP000009225 Componenti: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK03657.

Family and domain databases

Gene3Di1.10.10.160. 1 hit.
3.40.50.300. 4 hits.
InterProiIPR013986. DExx_box_DNA_helicase_dom.
IPR014017. DNA_helicase_UvrD-like_C.
IPR000212. DNA_helicase_UvrD/REP.
IPR027417. P-loop_NTPase.
IPR014016. UvrD-like_ATP-bd.
[Graphical view]
PANTHERiPTHR11070. PTHR11070. 1 hit.
PfamiPF00580. UvrD-helicase. 1 hit.
PF13361. UvrD_C. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.
PROSITEiPS51198. UVRD_HELICASE_ATP_BIND. 1 hit.
PS51217. UVRD_HELICASE_CTER. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F6B095-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFPIDLLDGT SGAAPAPNSP LLTHLNEEQL AAVTLPAGHA LILAGAGSGK
60 70 80 90 100
TRVLTTRIAW LLQTGQATPG SILAVTFTNK AAKEMLARLS AMLPYNVRGM
110 120 130 140 150
WIGTFHGLCN RLLRAHHQAA KLSSTFQILD TQDQLSAVKR LCKQFNVDDE
160 170 180 190 200
RFPPKQLQYF IAGCKEEGMR PGDVVANDPD TRKKVEIYQL YEEQCQREGV
210 220 230 240 250
VDFGELMLRS YELLRDDAAL RAHYQRRFRH IMVDEFQDTN KLQYQWLKQL
260 270 280 290 300
AGDMVDGRLQ ATGSVIAVGD DDQSIYAFRG ARVGNMQDFV REFDVRQQIK
310 320 330 340 350
LEQNYRSYSN ILDCANALIS HNSQRLGKNL RTTQGPGEPV RIYEAPTDMA
360 370 380 390 400
EAQWMVEEIQ QLVKKDGWQR QEIAVLYRSN AQSRVIESQL FNAAIPYRVY
410 420 430 440 450
GGLRFFERAE IKHALAYLRL LENPHDDTSF LRVVNFPPRG IGARSVETLQ
460 470 480 490 500
DAARSAGCSL HDAVSAVPGA PGTKLAGFVA KIDVLREQTQ GRTLREIIEA
510 520 530 540 550
IEEESGLLEH YRNEKEGADR IENLQELVNA AESFVTQEGF GRDAVALPLD
560 570 580 590 600
EHDGARALTQ SPASQGLDPA LPLLDTPLTP PAGAVAGMVD ADTGETLSPL
610 620 630 640 650
AAFLTHAALE AGDNQAQAGQ DAVQLMTVHA SKGLEFDAVF IGGVEEGLFP
660 670 680 690 700
HENAMMDRGG LEEERRLAYV AITRARKRLY LSHSQTRMLH GQTRYNVKSR
710 720 730 740 750
FFDELPDEAL KWITPKQGGF GSYAPRPGGG GGGGYGSRDR GGFGNKAEGW
760 770 780 790 800
RSEVFASPPV PPQKVAPGHG LRVGLNVFHN KFGEGKVLAL EGTGDDARAQ
810 820
VSFGRHGTKW LALSIAKLTV VE
Length:822
Mass (Da):90,461
Last modified:July 27, 2011 - v1
Checksum:iC4C7082395F25537
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002735 Genomic DNA. Translation: AEF88313.1.
RefSeqiWP_013800940.1. NC_015563.1.
YP_004486668.1. NC_015563.1.

Genome annotation databases

EnsemblBacteriaiAEF88313; AEF88313; DelCs14_1281.
KEGGidel:DelCs14_1281.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002735 Genomic DNA. Translation: AEF88313.1.
RefSeqiWP_013800940.1. NC_015563.1.
YP_004486668.1. NC_015563.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEF88313; AEF88313; DelCs14_1281.
KEGGidel:DelCs14_1281.

Phylogenomic databases

KOiK03657.

Enzyme and pathway databases

BioCyciDSP742013:GH2F-1305-MONOMER.

Family and domain databases

Gene3Di1.10.10.160. 1 hit.
3.40.50.300. 4 hits.
InterProiIPR013986. DExx_box_DNA_helicase_dom.
IPR014017. DNA_helicase_UvrD-like_C.
IPR000212. DNA_helicase_UvrD/REP.
IPR027417. P-loop_NTPase.
IPR014016. UvrD-like_ATP-bd.
[Graphical view]
PANTHERiPTHR11070. PTHR11070. 1 hit.
PfamiPF00580. UvrD-helicase. 1 hit.
PF13361. UvrD_C. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.
PROSITEiPS51198. UVRD_HELICASE_ATP_BIND. 1 hit.
PS51217. UVRD_HELICASE_CTER. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Delftia sp. Cs1-4."
    Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Teshima H., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Bradfield C., Sheety A.
    , Cheng S., Chain P., Denef V., Hickey W., Woyke T.
    Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Cs1-4Imported.

Entry informationi

Entry nameiF6B095_DELSC
AccessioniPrimary (citable) accession number: F6B095
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: April 29, 2015
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.