F6AV54 (F6AV54_DELSC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase EMBL AEF90322.1
EC=2.3.1.61 EMBL AEF90322.1

Gene names

Ordered Locus Names:

DelCs14_3327

Organism

Delftia sp. (strain Cs1-4) [Complete proteome] [HAMAP] EMBL AEF90322.1

Taxonomic identifier

742013 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Comamonadaceae › Delftia

Protein attributes

Sequence length	421 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the 2-oxoacid dehydrogenase family. RuleBase RU003423 Contains 1 lipoyl-binding domain. RuleBase RU000447

Ontologies

Keywords
Domain	Lipoyl SAAS SAAS003016 RuleBase RU000447
Molecular function	Acyltransferase RuleBase RU003765 EMBL AEF90322.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Cellular_component	oxoglutarate dehydrogenase complex Inferred from electronic annotation. Source: InterPro
Molecular_function	dihydrolipoyllysine-residue succinyltransferase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F6AV54 [UniParc]. Last modified July 27, 2011. Version 1. Checksum: 7099949B7969DC95	FASTA	421	43,555
	10 20 30 40 50 60 MAIVEVKVPQ LSESIAEATM LTWKKKAGEA VAIDEILIEI ETDKVVLEVP APAAGVLAEI 70 80 90 100 110 120 VQGDGATVVA EQLIAKIDTE GVAGVAAAAP AAAAAPAAAA PAAAPAAAAA TGGSKGDVAM 130 140 150 160 170 180 PAAAKLLAEN NLSAANVAGS GKDGRVTKGD ALAAVKGGVQ STAAVIPTGV PTKALPQVSA 190 200 210 220 230 240 PAAKEDLSGR PEQRVPMSRL RARVAERLLQ SQSTNAILTT FNEVNMAPVM DLRKKFQDAF 250 260 270 280 290 300 TKEHGTKLGF MSFFVKAAVH ALKKYPVLNA SVDGNDIVYH GYFDIGIAVG SPRGLVVPIL 310 320 330 340 350 360 RNADQMSFAD IEKKIAEFGK KAADGKLGIE DMTGGTFSIS NGGTFGSMMS TPIINPPQSA 370 380 390 400 410 420 ILGVHATKDR AMVENGQVVV RPMNYLAMSY DHRIIDGREA VLGLVAMKDA LEDPSRLLFD L

References

[1]

"Complete sequence of Delftia sp. Cs1-4." Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Teshima H., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Bradfield C., Sheety A. , Cheng S., Chain P., Denef V., Hickey W., Woyke T. Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Cs1-4.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002735 Genomic DNA. Translation: AEF90322.1.
RefSeq	YP_004488677.1. NC_015563.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEF90322; AEF90322; DelCs14_3327.
GeneID	10640184.
KEGG	del:DelCs14_3327.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K00658.
Enzyme and pathway databases
BioCyc	DSP742013:GH2F-3379-MONOMER.
Family and domain databases
Gene3D	3.30.559.10. 1 hit. 4.10.320.10. 1 hit.
InterPro	IPR003016. 2-oxoA_DH_lipoyl-BS. IPR001078. 2-oxoacid_DH_actylTfrase. IPR000089. Biotin_lipoyl. IPR023213. CAT-like_dom. IPR004167. E3-bd. IPR011053. Single_hybrid_motif. IPR006255. SucB. [Graphical view]
Pfam	PF00198. 2-oxoacid_dh. 1 hit. PF00364. Biotin_lipoyl. 1 hit. PF02817. E3_binding. 1 hit. [Graphical view]
SUPFAM	SSF47005. E3_bd. 1 hit. SSF51230. Hybrid_motif. 1 hit.
TIGRFAMs	TIGR01347. sucB. 1 hit.
PROSITE	PS50968. BIOTINYL_LIPOYL. 1 hit. PS00189. LIPOYL. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F6AV54_DELSC

Accession

Primary (citable) accession number: F6AV54

Entry history

Integrated into UniProtKB/TrEMBL:	July 27, 2011
Last sequence update:	July 27, 2011
Last modified:	April 3, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)