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F6AM22 (F6AM22_DELSC) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118

Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tuf HAMAP-Rule MF_00118
Ordered Locus Names:DelCs14_0402 EMBL AEF87442.1
OrganismDelftia sp. (strain Cs1-4) [Complete proteome] [HAMAP] EMBL AEF87442.1
Taxonomic identifier742013 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeDelftia

Protein attributes

Sequence length396 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding81 – 855GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding136 – 1394GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
F6AM22 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: 69B03EB74D455CFC

FASTA39643,121
        10         20         30         40         50         60 
MAKEKFQRNK PHVNVGTIGH VDHGKTTLTA AIATVLSKKF GGEAKAYDQI DAAPEEKARG 

        70         80         90        100        110        120 
ITINTAHVEY ETAGRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI 

       130        140        150        160        170        180 
LLARQVGVPY IIVFLNKCDM VDDEELLELV EMEVRELLAK YDFPGDDTPI IRGSAKLALE 

       190        200        210        220        230        240 
GDQSDKGEPA ILRLAEALDS YIPTPERAVD GAFAMPVEDV FSISGRGTVV TGRIERGIIK 

       250        260        270        280        290        300 
VGEEIEIVGI RDTQKTIVTG VEMFRKLLDQ GQAGDNVGLL LRGTKREDVE RGQVLCKPGS 

       310        320        330        340        350        360 
IKPHTHFTAE VYVLSKDEGG RHTPFFNNYR PQFYFRTTDV TGSIELPADK EMVMPGDNVS 

       370        380        390 
ITVKLIAPIA MEEGLRFAIR EGGRTVGAGV VAKIIA 

« Hide

References

[1]"Complete sequence of Delftia sp. Cs1-4."
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Teshima H., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Bradfield C., Sheety A. expand/collapse author list , Cheng S., Chain P., Denef V., Hickey W., Woyke T.
Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Cs1-4.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002735 Genomic DNA. Translation: AEF87442.1.
RefSeqYP_004485797.1. NC_015563.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEF87442; AEF87442; DelCs14_0402.
GeneID10637208.
KEGGdel:DelCs14_0402.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK02358.

Enzyme and pathway databases

BioCycDSP742013:GH2F-403-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF6AM22_DELSC
AccessionPrimary (citable) accession number: F6AM22
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: April 16, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)