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Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Delftia sp. (strain Cs1-4)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

Cofactori

Mg2+UniRule annotationSAAS annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei163 – 1631UniRule annotation
Active sitei605 – 6051UniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotation

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotation

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotation, PyruvateImported

Enzyme and pathway databases

BioCyciDSP742013:GH2F-4529-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotationSAAS annotation (EC:4.1.1.31UniRule annotationSAAS annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotation
Ordered Locus Names:DelCs14_4455Imported
OrganismiDelftia sp. (strain Cs1-4)Imported
Taxonomic identifieri742013 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeDelftia
ProteomesiUP000009225 Componenti: Chromosome

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

KOiK01595.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F6ALK6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATAPRKSNA RDDRRDDKPV RKTDKDLPLI EDIRLLGRIL GDVIREQEGV
60 70 80 90 100
AAFELIEQVR QLSVTFRRDA DETADRALKR LLKGLTTDQT VSVIRAFTYF
110 120 130 140 150
SHLANLAEDR HHIRRRAVHE RAGNTQEGSI EVALARLRWA GISAGTVAQT
160 170 180 190 200
LAKSYVAPVL TAHPTEVQRQ SILVAERDIS QLLAAREDIV ARAQLYNSAK
210 220 230 240 250
DALTPRELER NEAQLRARVS QLWQTRLLRY SKLTVADEIE NALSYYEATF
260 270 280 290 300
LREIPKLYAQ LEQELGNTLP VHSFLRMGHW IGGDRDGNPN VTAQSLELAL
310 320 330 340 350
SRQADVALRH YLREVHYLGG ELSLSQRLTD VSTEMQALAE RSPDTNEHRS
360 370 380 390 400
DEPYRRALTG IYARLAATLK GLTGGEAARH AVAPQNAYAS PEEFLADLRV
410 420 430 440 450
IDDSLSRNHG EVLAPQRLRP LMRAVQVFGF HLATVDLRQS SDKHEEVVAE
460 470 480 490 500
LLAAARLEPD YSGLQEDAKC ALLVRLLEEA RPLRVVGADY SEHARGELAI
510 520 530 540 550
FETARRLRAA LGAEAIRHCI ISHTESVSDL LEVLLLQKEA GLLRGTLDDG
560 570 580 590 600
AICDVIVVPL FETIGDLRSA SPIMRRYFQL PGVAAMVQRS GGEQDIMLGY
610 620 630 640 650
SDSNKDGGIF TSNWELYRAE ISLVELFDEL ADSHGISLRM FHGRGGTVGR
660 670 680 690 700
GGGPSYQAIL AQPPGTVRGQ IRLTEQGEVI ASKYANPEIG RRNLETLVAA
710 720 730 740 750
TLEATLLQPT KPATRAFLDA AAFLSDASMG AYRALVYETP GFTSYFFSST
760 770 780 790 800
PIREIAELNI GSRPASRKPS QKIEDLRAIP WGFSWGQCRL TLPGWYGFGA
810 820 830 840 850
AVKAFIDQPG KDGKAQLALL QKMYRQWPFF RTLLSNMDMV LAKSDLNLAS
860 870 880 890 900
RYADLVPDAR LRRRIFSAIE AEWHSTVDAL ARITGDKQRL AHNEALARSI
910 920 930 940
RHRFPYIDPL HHLQVELVRR WRAGQTDERI KTGIHLSING IAAGVRNTG
Length:949
Mass (Da):105,745
Last modified:July 27, 2011 - v1
Checksum:i09919CD9C925EF81
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002735 Genomic DNA. Translation: AEF91434.1.
RefSeqiYP_004489789.1. NC_015563.1.

Genome annotation databases

EnsemblBacteriaiAEF91434; AEF91434; DelCs14_4455.
GeneIDi10641333.
KEGGidel:DelCs14_4455.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002735 Genomic DNA. Translation: AEF91434.1.
RefSeqiYP_004489789.1. NC_015563.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEF91434; AEF91434; DelCs14_4455.
GeneIDi10641333.
KEGGidel:DelCs14_4455.

Phylogenomic databases

KOiK01595.

Enzyme and pathway databases

BioCyciDSP742013:GH2F-4529-MONOMER.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Delftia sp. Cs1-4."
    Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Teshima H., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Bradfield C., Sheety A.
    , Cheng S., Chain P., Denef V., Hickey W., Woyke T.
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Cs1-4Imported.

Entry informationi

Entry nameiF6ALK6_DELSC
AccessioniPrimary (citable) accession number: F6ALK6
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: March 4, 2015
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.