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F6AK43 (F6AK43_PSEF1) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length357 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201

Sequence similarities

Belongs to the alanine racemase family. RuleBase RU004188 HAMAP-Rule MF_01201

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site331Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2531Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1291Substrate By similarity HAMAP-Rule MF_01201
Binding site3011Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue331N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
F6AK43 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: 4EB8DD44BF87B038

FASTA35738,816
        10         20         30         40         50         60 
MRPARALIDL QALRHNYQLA RELAGARALA VVKADAYGHG AVRCAQALQG DADGFAVACI 

        70         80         90        100        110        120 
EEALQLRAAG ITAPILLLEG FFEASELALI DEHDLWCVVH AEWQLEAIEQ TNLKRPLNVW 

       130        140        150        160        170        180 
LKLDSGMHRV GFHPADYQAA YRRLLASGKV VKIVLMSHFS RADELDCPRS NEQLAVFQQA 

       190        200        210        220        230        240 
REGLAAEVSL RNSPALLGWP SIPSDWSRPG IMLYGATPFE QAQEVAARLQ PVMTLESRVI 

       250        260        270        280        290        300 
SVRDLPAGEP VGYGARFVSE RATRVGVVAM GYADGYPRHA PTGTPVLIDG QPSRIIGRVS 

       310        320        330        340        350 
MDMLTVDLSD LPGAGLGSRV EFWGRGVLAS DVALAAGTIP YQLFCNVRRV PLIYSEA 

« Hide

References

[1]"Complete sequence of Pseudomonas fulva 12-X."
US DOE Joint Genome Institute
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Pagani I., Davenport K., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Lcollab F.I., Woyke T.
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 12-X.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002727 Genomic DNA. Translation: AEF20689.1.
RefSeqYP_004472783.1. NC_015556.1.

3D structure databases

ProteinModelPortalF6AK43.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEF20689; AEF20689; Psefu_0711.
GeneID10656042.
KEGGpfv:Psefu_0711.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01775.
OMALWQLEAI.

Enzyme and pathway databases

BioCycPFUL743720:GHQV-728-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF6AK43_PSEF1
AccessionPrimary (citable) accession number: F6AK43
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: July 9, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)