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F6A9X4

- F6A9X4_PSEF1

UniProt

F6A9X4 - F6A9X4_PSEF1

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Psefu_2075

Organism
Pseudomonas fulva (strain 12-X)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 14 (01 Oct 2014)
      Sequence version 1 (27 Jul 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciPFUL743720:GHQV-2105-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Psefu_2075Imported
    OrganismiPseudomonas fulva (strain 12-X)Imported
    Taxonomic identifieri743720 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
    ProteomesiUP000000686: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliF6A9X4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.
    OMAiRVWLWSR.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F6A9X4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MIAFAQLYAR LDATTSSNAK LAALQDYLRD AEPADAAWAV YFLAGGRPRQ    50
    LVPSRQLREL AMQRAGLSDW LFEESYSAVG DLAETIALLL PEATSTSEDG 100
    LAVWVEQKLL PLRGLPPDEL AMRLDALWAQ LDRQSLMVSI KLITGAFRVG 150
    VSKLLVTRAL AAIAEVDAKR VAQRLVGYTD LSNRPTAASY ERLIAAESED 200
    EHAQRGGQPY PFFLAHPLQR PLEEFDASLG SPGDWLIEWK WDGIRAQLVK 250
    RDGQLWVWSR GEELISERFP ELQELAPLLP DGTVIDGELV VWRHAPEATA 300
    RQGELMAAAA DEPAERLNDQ VEEQLERFGI QPFALLQQRI GRKTLSRKLL 350
    EEVPVAVLAY DLLEWQGEDW RSHPQHQRRA QMEQVVARCA SPRLMPSPLL 400
    HGDTWQALAE QREASRSLGV EGMMLKARES AYGVGRSKDV GVWWKWKIDP 450
    LSVDAVLIYA QRGHGRRASL YSDYTFAVWD GAPGDPERRL VPFAKAYSGL 500
    TDEEMRKVDA IVRKTTVEKF GPVRSVTPSL VFELGFEGIA RSPRHKSGIA 550
    VRFPRMLRWR HDKGVEEADT LELLQELLP 579
    Length:579
    Mass (Da):65,045
    Last modified:July 27, 2011 - v1
    Checksum:iCA1E93CECC99472F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002727 Genomic DNA. Translation: AEF22046.1.
    RefSeqiYP_004474140.1. NC_015556.1.

    Genome annotation databases

    EnsemblBacteriaiAEF22046; AEF22046; Psefu_2075.
    GeneIDi10658892.
    KEGGipfv:Psefu_2075.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002727 Genomic DNA. Translation: AEF22046.1 .
    RefSeqi YP_004474140.1. NC_015556.1.

    3D structure databases

    ProteinModelPortali F6A9X4.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEF22046 ; AEF22046 ; Psefu_2075 .
    GeneIDi 10658892.
    KEGGi pfv:Psefu_2075.

    Phylogenomic databases

    KOi K01971.
    OMAi RVWLWSR.

    Enzyme and pathway databases

    BioCyci PFUL743720:GHQV-2105-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 12-XImported.

    Entry informationi

    Entry nameiF6A9X4_PSEF1
    AccessioniPrimary (citable) accession number: F6A9X4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 27, 2011
    Last sequence update: July 27, 2011
    Last modified: October 1, 2014
    This is version 14 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3