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F6A9X4

- F6A9X4_PSEF1

UniProt

F6A9X4 - F6A9X4_PSEF1

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Protein
Submitted name:

ATP dependent DNA ligase

Gene
Psefu_2075
Organism
Pseudomonas fulva (strain 12-X)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciPFUL743720:GHQV-2105-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Psefu_2075Imported
OrganismiPseudomonas fulva (strain 12-X)Imported
Taxonomic identifieri743720 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000000686: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF6A9X4.

Family & Domainsi

Phylogenomic databases

KOiK01971.
OMAiRVWLWSR.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F6A9X4-1 [UniParc]FASTAAdd to Basket

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MIAFAQLYAR LDATTSSNAK LAALQDYLRD AEPADAAWAV YFLAGGRPRQ    50
LVPSRQLREL AMQRAGLSDW LFEESYSAVG DLAETIALLL PEATSTSEDG 100
LAVWVEQKLL PLRGLPPDEL AMRLDALWAQ LDRQSLMVSI KLITGAFRVG 150
VSKLLVTRAL AAIAEVDAKR VAQRLVGYTD LSNRPTAASY ERLIAAESED 200
EHAQRGGQPY PFFLAHPLQR PLEEFDASLG SPGDWLIEWK WDGIRAQLVK 250
RDGQLWVWSR GEELISERFP ELQELAPLLP DGTVIDGELV VWRHAPEATA 300
RQGELMAAAA DEPAERLNDQ VEEQLERFGI QPFALLQQRI GRKTLSRKLL 350
EEVPVAVLAY DLLEWQGEDW RSHPQHQRRA QMEQVVARCA SPRLMPSPLL 400
HGDTWQALAE QREASRSLGV EGMMLKARES AYGVGRSKDV GVWWKWKIDP 450
LSVDAVLIYA QRGHGRRASL YSDYTFAVWD GAPGDPERRL VPFAKAYSGL 500
TDEEMRKVDA IVRKTTVEKF GPVRSVTPSL VFELGFEGIA RSPRHKSGIA 550
VRFPRMLRWR HDKGVEEADT LELLQELLP 579
Length:579
Mass (Da):65,045
Last modified:July 27, 2011 - v1
Checksum:iCA1E93CECC99472F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002727 Genomic DNA. Translation: AEF22046.1.
RefSeqiYP_004474140.1. NC_015556.1.

Genome annotation databases

EnsemblBacteriaiAEF22046; AEF22046; Psefu_2075.
GeneIDi10658892.
KEGGipfv:Psefu_2075.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002727 Genomic DNA. Translation: AEF22046.1 .
RefSeqi YP_004474140.1. NC_015556.1.

3D structure databases

ProteinModelPortali F6A9X4.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEF22046 ; AEF22046 ; Psefu_2075 .
GeneIDi 10658892.
KEGGi pfv:Psefu_2075.

Phylogenomic databases

KOi K01971.
OMAi RVWLWSR.

Enzyme and pathway databases

BioCyci PFUL743720:GHQV-2105-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 12-X.

Entry informationi

Entry nameiF6A9X4_PSEF1
AccessioniPrimary (citable) accession number: F6A9X4
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: May 14, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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