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Protein
Submitted name:

ROK family protein

Gene

HMPREF9231_0774

Organism
Gardnerella vaginalis (strain HMP9231)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciGVAG1009464:GLDL-771-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ROK family proteinImported
Gene namesi
Ordered Locus Names:HMPREF9231_0774Imported
OrganismiGardnerella vaginalis (strain HMP9231)Imported
Taxonomic identifieri1009464 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaBifidobacterialesBifidobacteriaceaeGardnerella
ProteomesiUP000009050 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF6A2H0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK00886.
OrthoDBiEOG6VTK5N.

Family and domain databases

InterProiIPR000600. ROK.
[Graphical view]
PfamiPF00480. ROK. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F6A2H0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIDTAQAFGV DIGGSGIKAA PVNLEKGEFA EPRYKILTPA VSTPQAVADI
60 70 80 90 100
VRQQLEHFDV PADVPVGIAF PAPIKPGKKL EFMANLDQSW IGVDVTEVFS
110 120 130 140 150
EACGRPVTVV NDADAAGLAE QHFGAAKDKD GLVIATTLGT GIGTALIYNG
160 170 180 190 200
TLIPNTELGH IQLEKGKGDA EKYAASSVRE KLDMGYKKWA KRLTKYYGLM
210 220 230 240 250
EKYFNPDLFV VGGGVSRVSE KFLPHIDIKT PIVVASLHNE AGIIGAAYYA

MQQRNN
Length:256
Mass (Da):27,475
Last modified:July 27, 2011 - v1
Checksum:iAF26536DF9936B42
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002725 Genomic DNA. Translation: AEF31419.1.
RefSeqiWP_004111678.1. NC_017456.1.

Genome annotation databases

EnsemblBacteriaiAEF31419; AEF31419; HMPREF9231_0774.
KEGGigvh:HMPREF9231_0774.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002725 Genomic DNA. Translation: AEF31419.1.
RefSeqiWP_004111678.1. NC_017456.1.

3D structure databases

ProteinModelPortaliF6A2H0.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEF31419; AEF31419; HMPREF9231_0774.
KEGGigvh:HMPREF9231_0774.

Phylogenomic databases

KOiK00886.
OrthoDBiEOG6VTK5N.

Enzyme and pathway databases

BioCyciGVAG1009464:GLDL-771-MONOMER.

Family and domain databases

InterProiIPR000600. ROK.
[Graphical view]
PfamiPF00480. ROK. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Gardnerella vaginalis HMP9231."
    Durkin A.S., Kim M.K., Hostetler J., Torralba M., Gillis M., Methe B., Sutton G., Nelson K.E.
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HMP9231Imported.

Entry informationi

Entry nameiF6A2H0_GARVH
AccessioniPrimary (citable) accession number: F6A2H0
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: July 22, 2015
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.