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F6A2H0 (F6A2H0_GARVH) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:HMPREF9231_0774 EMBL AEF31419.1
OrganismGardnerella vaginalis (strain HMP9231) [Complete proteome] [HAMAP] EMBL AEF31419.1
Taxonomic identifier1009464 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeGardnerella

Protein attributes

Sequence length256 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
F6A2H0 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: AF26536DF9936B42

FASTA25627,475
        10         20         30         40         50         60 
MIDTAQAFGV DIGGSGIKAA PVNLEKGEFA EPRYKILTPA VSTPQAVADI VRQQLEHFDV 

        70         80         90        100        110        120 
PADVPVGIAF PAPIKPGKKL EFMANLDQSW IGVDVTEVFS EACGRPVTVV NDADAAGLAE 

       130        140        150        160        170        180 
QHFGAAKDKD GLVIATTLGT GIGTALIYNG TLIPNTELGH IQLEKGKGDA EKYAASSVRE 

       190        200        210        220        230        240 
KLDMGYKKWA KRLTKYYGLM EKYFNPDLFV VGGGVSRVSE KFLPHIDIKT PIVVASLHNE 

       250 
AGIIGAAYYA MQQRNN 

« Hide

References

[1]"Complete sequence of Gardnerella vaginalis HMP9231."
Durkin A.S., Kim M.K., Hostetler J., Torralba M., Gillis M., Methe B., Sutton G., Nelson K.E.
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HMP9231.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002725 Genomic DNA. Translation: AEF31419.1.
RefSeqYP_005838116.1. NC_017456.1.

3D structure databases

ProteinModelPortalF6A2H0.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEF31419; AEF31419; HMPREF9231_0774.
GeneID12444882.
KEGGgvh:HMPREF9231_0774.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00886.
OrthoDBEOG6VTK5N.

Enzyme and pathway databases

BioCycGVAG1009464:GLDL-771-MONOMER.

Family and domain databases

InterProIPR000600. ROK.
[Graphical view]
PfamPF00480. ROK. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF6A2H0_GARVH
AccessionPrimary (citable) accession number: F6A2H0
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: December 11, 2013
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)