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Protein
Submitted name:

BNR/Asp-box repeat protein

Gene

HMPREF9231_0063

Organism
Gardnerella vaginalis (strain HMP9231)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. exo-alpha-sialidase activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciGVAG1009464:GLDL-63-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
BNR/Asp-box repeat proteinImported
Gene namesi
Ordered Locus Names:HMPREF9231_0063Imported
OrganismiGardnerella vaginalis (strain HMP9231)Imported
Taxonomic identifieri1009464 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeGardnerella
ProteomesiUP000009050 Componenti: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01186.
OrthoDBiEOG61CM2G.

Family and domain databases

Gene3Di2.120.10.10. 2 hits.
2.60.120.200. 1 hit.
InterProiIPR013320. ConA-like_dom.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
SUPFAMiSSF49899. SSF49899. 1 hit.
SSF50939. SSF50939. 2 hits.

Sequencei

Sequence statusi: Complete.

F6A0K1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MERRSTKTTS LIEDIADIKG SEHTRFNHAT IKITPSSEIK KYSENESGIN
60 70 80 90 100
RKDKNEEINQ NEGIIGFKFV ANSDCDLLDI KPAQKSQATA QQEHTTPIIK
110 120 130 140 150
ISIKEDAPLL SAQNLLEDSA DANGAKEIAL QMEDALGACD GREHDFAITY
160 170 180 190 200
GSFGSRFYLD GYQCFASATN LGPQRVSEKA AEVCAAQAES SQIYDFYYSN
210 220 230 240 250
HLPNPEEIAN SSTQAQPDIW FAGPTICARD IKRVSCKSSG TLHIQFRLRG
260 270 280 290 300
PGQHGVLFAA GTAGTKTNLE SSEKISVYAG PEGIKITLID YETCVKSVIE
310 320 330 340 350
AAASVDDGEW HDLIIRANRG ATDIYVDGYS QSHNIGQFWF ANIPELNAVS
360 370 380 390 400
IGEDLRGVRL MGEARIGGIY FSALTEGQIQ RISRAKPLVT TALFDTGYAG
410 420 430 440 450
SRSYRIPSLV KTRMGTLIAG ADQRTSVSND APNHINFVIR RSTDGGKTWG
460 470 480 490 500
PLQTVINMPG KNLGKLGASA IDSCPILDPA GKSERINVLI DINPGGIGLT
510 520 530 540 550
NCKTAVGVDA CGRIKLIDRL GGNYAAAMNG SAAVKLPCDS SEKECATKWL
560 570 580 590 600
VFPDGSIKNC DSHNDLRNNS HSNQTCDSST WNIWKSQEIA SESQPLFAEK
610 620 630 640 650
TCYIAQIYSD DDGKTWSTPR LIDHMVKEPW MSFAGVCPGN GIVIRQSEKH
660 670 680 690 700
YGRILVPFYC SGQSKSHYSS GALISDDGGK TWNRGKMINE GRLINGKIVD
710 720 730 740 750
PVTMQDDDAT SSETVFVERK NGDILAFFRN QNRSGCVGKA ISHDCGETWS
760 770 780 790 800
ELIFDTSLPE IFSQPSATCF NSENADNADC IAFANASQMM PYRGRGVVRF
810 820 830 840 850
SYDGGKTWAK NVCINPLHHV YQCLSSSNKR TLQLLWERET TGIYITAIDS
860 870 880 890 900
NLWKQDNLQI DFKSNAKSLN NTDLDCIKNK INTSEKMKDL EEGSLTRTER

SQHGRDI
Length:907
Mass (Da):99,482
Last modified:July 27, 2011 - v1
Checksum:i51DA0823AB8C38E9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002725 Genomic DNA. Translation: AEF32073.1.
RefSeqiWP_014554273.1. NC_017456.1.
YP_005837447.1. NC_017456.1.

Genome annotation databases

EnsemblBacteriaiAEF32073; AEF32073; HMPREF9231_0063.
KEGGigvh:HMPREF9231_0063.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002725 Genomic DNA. Translation: AEF32073.1.
RefSeqiWP_014554273.1. NC_017456.1.
YP_005837447.1. NC_017456.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEF32073; AEF32073; HMPREF9231_0063.
KEGGigvh:HMPREF9231_0063.

Phylogenomic databases

KOiK01186.
OrthoDBiEOG61CM2G.

Enzyme and pathway databases

BioCyciGVAG1009464:GLDL-63-MONOMER.

Family and domain databases

Gene3Di2.120.10.10. 2 hits.
2.60.120.200. 1 hit.
InterProiIPR013320. ConA-like_dom.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
SUPFAMiSSF49899. SSF49899. 1 hit.
SSF50939. SSF50939. 2 hits.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Gardnerella vaginalis HMP9231."
    Durkin A.S., Kim M.K., Hostetler J., Torralba M., Gillis M., Methe B., Sutton G., Nelson K.E.
    Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HMP9231Imported.

Entry informationi

Entry nameiF6A0K1_GARVH
AccessioniPrimary (citable) accession number: F6A0K1
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: April 1, 2015
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.