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F6A0K1

- F6A0K1_GARVH

UniProt

F6A0K1 - F6A0K1_GARVH

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Protein
Submitted name: BNR/Asp-box repeat protein
Gene
HMPREF9231_0063
Organism
Gardnerella vaginalis (strain HMP9231)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. exo-alpha-sialidase activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciGVAG1009464:GLDL-63-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
BNR/Asp-box repeat proteinImported
Gene namesi
Ordered Locus Names:HMPREF9231_0063Imported
OrganismiGardnerella vaginalis (strain HMP9231)Imported
Taxonomic identifieri1009464 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeGardnerella
ProteomesiUP000009050: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01186.
OrthoDBiEOG61CM2G.

Family and domain databases

Gene3Di2.120.10.10. 2 hits.
2.60.120.200. 1 hit.
InterProiIPR008985. ConA-like_lec_gl_sf.
IPR013320. ConA-like_subgrp.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
SUPFAMiSSF49899. SSF49899. 1 hit.
SSF50939. SSF50939. 2 hits.

Sequencei

Sequence statusi: Complete.

F6A0K1-1 [UniParc]FASTAAdd to Basket

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MERRSTKTTS LIEDIADIKG SEHTRFNHAT IKITPSSEIK KYSENESGIN    50
RKDKNEEINQ NEGIIGFKFV ANSDCDLLDI KPAQKSQATA QQEHTTPIIK 100
ISIKEDAPLL SAQNLLEDSA DANGAKEIAL QMEDALGACD GREHDFAITY 150
GSFGSRFYLD GYQCFASATN LGPQRVSEKA AEVCAAQAES SQIYDFYYSN 200
HLPNPEEIAN SSTQAQPDIW FAGPTICARD IKRVSCKSSG TLHIQFRLRG 250
PGQHGVLFAA GTAGTKTNLE SSEKISVYAG PEGIKITLID YETCVKSVIE 300
AAASVDDGEW HDLIIRANRG ATDIYVDGYS QSHNIGQFWF ANIPELNAVS 350
IGEDLRGVRL MGEARIGGIY FSALTEGQIQ RISRAKPLVT TALFDTGYAG 400
SRSYRIPSLV KTRMGTLIAG ADQRTSVSND APNHINFVIR RSTDGGKTWG 450
PLQTVINMPG KNLGKLGASA IDSCPILDPA GKSERINVLI DINPGGIGLT 500
NCKTAVGVDA CGRIKLIDRL GGNYAAAMNG SAAVKLPCDS SEKECATKWL 550
VFPDGSIKNC DSHNDLRNNS HSNQTCDSST WNIWKSQEIA SESQPLFAEK 600
TCYIAQIYSD DDGKTWSTPR LIDHMVKEPW MSFAGVCPGN GIVIRQSEKH 650
YGRILVPFYC SGQSKSHYSS GALISDDGGK TWNRGKMINE GRLINGKIVD 700
PVTMQDDDAT SSETVFVERK NGDILAFFRN QNRSGCVGKA ISHDCGETWS 750
ELIFDTSLPE IFSQPSATCF NSENADNADC IAFANASQMM PYRGRGVVRF 800
SYDGGKTWAK NVCINPLHHV YQCLSSSNKR TLQLLWERET TGIYITAIDS 850
NLWKQDNLQI DFKSNAKSLN NTDLDCIKNK INTSEKMKDL EEGSLTRTER 900
SQHGRDI 907
Length:907
Mass (Da):99,482
Last modified:July 27, 2011 - v1
Checksum:i51DA0823AB8C38E9
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002725 Genomic DNA. Translation: AEF32073.1.
RefSeqiWP_014554273.1. NC_017456.1.
YP_005837447.1. NC_017456.1.

Genome annotation databases

EnsemblBacteriaiAEF32073; AEF32073; HMPREF9231_0063.
GeneIDi12444174.
KEGGigvh:HMPREF9231_0063.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002725 Genomic DNA. Translation: AEF32073.1 .
RefSeqi WP_014554273.1. NC_017456.1.
YP_005837447.1. NC_017456.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEF32073 ; AEF32073 ; HMPREF9231_0063 .
GeneIDi 12444174.
KEGGi gvh:HMPREF9231_0063.

Phylogenomic databases

KOi K01186.
OrthoDBi EOG61CM2G.

Enzyme and pathway databases

BioCyci GVAG1009464:GLDL-63-MONOMER.

Family and domain databases

Gene3Di 2.120.10.10. 2 hits.
2.60.120.200. 1 hit.
InterProi IPR008985. ConA-like_lec_gl_sf.
IPR013320. ConA-like_subgrp.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view ]
PANTHERi PTHR10628. PTHR10628. 1 hit.
SUPFAMi SSF49899. SSF49899. 1 hit.
SSF50939. SSF50939. 2 hits.
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Gardnerella vaginalis HMP9231."
    Durkin A.S., Kim M.K., Hostetler J., Torralba M., Gillis M., Methe B., Sutton G., Nelson K.E.
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HMP9231.

Entry informationi

Entry nameiF6A0K1_GARVH
AccessioniPrimary (citable) accession number: F6A0K1
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: September 3, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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