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F6A0K1

- F6A0K1_GARVH

UniProt

F6A0K1 - F6A0K1_GARVH

Protein
Submitted name:

BNR/Asp-box repeat protein

Gene

HMPREF9231_0063

Organism
Gardnerella vaginalis (strain HMP9231)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 19 (01 Oct 2014)
      Sequence version 1 (27 Jul 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. exo-alpha-sialidase activity Source: InterPro

    Enzyme and pathway databases

    BioCyciGVAG1009464:GLDL-63-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    BNR/Asp-box repeat proteinImported
    Gene namesi
    Ordered Locus Names:HMPREF9231_0063Imported
    OrganismiGardnerella vaginalis (strain HMP9231)Imported
    Taxonomic identifieri1009464 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeGardnerella
    ProteomesiUP000009050: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01186.
    OrthoDBiEOG61CM2G.

    Family and domain databases

    Gene3Di2.120.10.10. 2 hits.
    2.60.120.200. 1 hit.
    InterProiIPR008985. ConA-like_lec_gl_sf.
    IPR013320. ConA-like_subgrp.
    IPR026856. Sialidase_fam.
    IPR011040. Sialidases.
    [Graphical view]
    PANTHERiPTHR10628. PTHR10628. 1 hit.
    SUPFAMiSSF49899. SSF49899. 1 hit.
    SSF50939. SSF50939. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    F6A0K1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MERRSTKTTS LIEDIADIKG SEHTRFNHAT IKITPSSEIK KYSENESGIN    50
    RKDKNEEINQ NEGIIGFKFV ANSDCDLLDI KPAQKSQATA QQEHTTPIIK 100
    ISIKEDAPLL SAQNLLEDSA DANGAKEIAL QMEDALGACD GREHDFAITY 150
    GSFGSRFYLD GYQCFASATN LGPQRVSEKA AEVCAAQAES SQIYDFYYSN 200
    HLPNPEEIAN SSTQAQPDIW FAGPTICARD IKRVSCKSSG TLHIQFRLRG 250
    PGQHGVLFAA GTAGTKTNLE SSEKISVYAG PEGIKITLID YETCVKSVIE 300
    AAASVDDGEW HDLIIRANRG ATDIYVDGYS QSHNIGQFWF ANIPELNAVS 350
    IGEDLRGVRL MGEARIGGIY FSALTEGQIQ RISRAKPLVT TALFDTGYAG 400
    SRSYRIPSLV KTRMGTLIAG ADQRTSVSND APNHINFVIR RSTDGGKTWG 450
    PLQTVINMPG KNLGKLGASA IDSCPILDPA GKSERINVLI DINPGGIGLT 500
    NCKTAVGVDA CGRIKLIDRL GGNYAAAMNG SAAVKLPCDS SEKECATKWL 550
    VFPDGSIKNC DSHNDLRNNS HSNQTCDSST WNIWKSQEIA SESQPLFAEK 600
    TCYIAQIYSD DDGKTWSTPR LIDHMVKEPW MSFAGVCPGN GIVIRQSEKH 650
    YGRILVPFYC SGQSKSHYSS GALISDDGGK TWNRGKMINE GRLINGKIVD 700
    PVTMQDDDAT SSETVFVERK NGDILAFFRN QNRSGCVGKA ISHDCGETWS 750
    ELIFDTSLPE IFSQPSATCF NSENADNADC IAFANASQMM PYRGRGVVRF 800
    SYDGGKTWAK NVCINPLHHV YQCLSSSNKR TLQLLWERET TGIYITAIDS 850
    NLWKQDNLQI DFKSNAKSLN NTDLDCIKNK INTSEKMKDL EEGSLTRTER 900
    SQHGRDI 907
    Length:907
    Mass (Da):99,482
    Last modified:July 27, 2011 - v1
    Checksum:i51DA0823AB8C38E9
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002725 Genomic DNA. Translation: AEF32073.1.
    RefSeqiWP_014554273.1. NC_017456.1.
    YP_005837447.1. NC_017456.1.

    Genome annotation databases

    EnsemblBacteriaiAEF32073; AEF32073; HMPREF9231_0063.
    GeneIDi12444174.
    KEGGigvh:HMPREF9231_0063.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002725 Genomic DNA. Translation: AEF32073.1 .
    RefSeqi WP_014554273.1. NC_017456.1.
    YP_005837447.1. NC_017456.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEF32073 ; AEF32073 ; HMPREF9231_0063 .
    GeneIDi 12444174.
    KEGGi gvh:HMPREF9231_0063.

    Phylogenomic databases

    KOi K01186.
    OrthoDBi EOG61CM2G.

    Enzyme and pathway databases

    BioCyci GVAG1009464:GLDL-63-MONOMER.

    Family and domain databases

    Gene3Di 2.120.10.10. 2 hits.
    2.60.120.200. 1 hit.
    InterProi IPR008985. ConA-like_lec_gl_sf.
    IPR013320. ConA-like_subgrp.
    IPR026856. Sialidase_fam.
    IPR011040. Sialidases.
    [Graphical view ]
    PANTHERi PTHR10628. PTHR10628. 1 hit.
    SUPFAMi SSF49899. SSF49899. 1 hit.
    SSF50939. SSF50939. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Gardnerella vaginalis HMP9231."
      Durkin A.S., Kim M.K., Hostetler J., Torralba M., Gillis M., Methe B., Sutton G., Nelson K.E.
      Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HMP9231Imported.

    Entry informationi

    Entry nameiF6A0K1_GARVH
    AccessioniPrimary (citable) accession number: F6A0K1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 27, 2011
    Last sequence update: July 27, 2011
    Last modified: October 1, 2014
    This is version 19 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3