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Protein

DNA-binding protein

Gene

hns

Organism
Salmonella typhimurium (strain ATCC 68169 / UK-1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-KW

GO - Biological processi

  1. regulation of transcription, DNA-templated Source: InterPro
Complete GO annotation...

Keywords - Ligandi

DNA-bindingUniRule annotationImported

Enzyme and pathway databases

BioCyciSENT990282:GHYP-1724-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
DNA-binding proteinUniRule annotation
Gene namesi
Name:hnsImported
Ordered Locus Names:STMUK_1724Imported
OrganismiSalmonella typhimurium (strain ATCC 68169 / UK-1)Imported
Taxonomic identifieri990282 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSalmonella
ProteomesiUP000008278: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. intracellular Source: InterPro
Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiF5ZQZ4.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4ICGX-ray2.92A/B2-46[»]
ProteinModelPortaliF5ZQZ4.
SMRiF5ZQZ4. Positions 2-47, 91-137.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the histone-like protein H-NS family.UniRule annotation

Family and domain databases

Gene3Di1.10.287.1050. 1 hit.
4.10.430.10. 1 hit.
InterProiIPR027444. H-NS_C_dom.
IPR001801. Histone_HNS.
IPR027454. Histone_HNS_oligo_dom.
[Graphical view]
PfamiPF00816. Histone_HNS. 1 hit.
[Graphical view]
PIRSFiPIRSF002096. HnS. 1 hit.
SMARTiSM00528. HNS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F5ZQZ4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSEALKILNN IRTLRAQARE CTLETLEEML EKLEVVVNER REEESAAAAE
60 70 80 90 100
VEERTRKLQQ YREMLIADGI DPNELLNSMA AAKSGTKAKR AARPAKYSYV
110 120 130
DENGETKTWT GQGRTPAVIK KAMEEQGKQL EDFLIKE
Length:137
Mass (Da):15,543
Last modified:July 27, 2011 - v1
Checksum:iA9620E5CC7DD3EB1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002614 Genomic DNA. Translation: AEF07624.1.
RefSeqiYP_005252258.1. NC_016863.1.

Genome annotation databases

EnsemblBacteriaiAEF07624; AEF07624; STMUK_1724.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002614 Genomic DNA. Translation: AEF07624.1.
RefSeqiYP_005252258.1. NC_016863.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4ICGX-ray2.92A/B2-46[»]
ProteinModelPortaliF5ZQZ4.
SMRiF5ZQZ4. Positions 2-47, 91-137.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiF5ZQZ4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEF07624; AEF07624; STMUK_1724.

Enzyme and pathway databases

BioCyciSENT990282:GHYP-1724-MONOMER.

Family and domain databases

Gene3Di1.10.287.1050. 1 hit.
4.10.430.10. 1 hit.
InterProiIPR027444. H-NS_C_dom.
IPR001801. Histone_HNS.
IPR027454. Histone_HNS_oligo_dom.
[Graphical view]
PfamiPF00816. Histone_HNS. 1 hit.
[Graphical view]
PIRSFiPIRSF002096. HnS. 1 hit.
SMARTiSM00528. HNS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Complete genome sequence of the universal killer Salmonella enterica serovar typhimurium UK-1 (ATCC 68169)."
    Luo Y., Kong Q., Yang J., Golden G., Wanda S.Y., Jensen R.V., Ernst P.B., Curtiss R. III.
    J. Bacteriol. 193:4035-4036(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 68169 / UK-1Imported.
  2. "Structural insights into the regulation of foreign genes in Salmonella by the Hha/H-NS complex."
    Ali S.S., Whitney J.C., Stevenson J., Robinson H., Howell P.L., Navarre W.W.
    J. Biol. Chem. 288:13356-13369(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.92 ANGSTROMS) OF 2-46.

Entry informationi

Entry nameiF5ZQZ4_SALTU
AccessioniPrimary (citable) accession number: F5ZQZ4
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: January 7, 2015
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.