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Protein
Submitted name:

Alpha-amylase

Gene

STP_0342

Organism
Streptococcus parauberis (strain KCTC 11537)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei234 – 2341NucleophileUniRule annotation
Active sitei264 – 2641Proton donorUniRule annotation

GO - Molecular functioni

  1. calcium ion binding Source: InterPro
  2. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciSPAR936154:GHCN-375-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported
Gene namesi
Ordered Locus Names:STP_0342Imported
OrganismiStreptococcus parauberis (strain KCTC 11537)Imported
Taxonomic identifieri936154 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus
ProteomesiUP000008277: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01176.
OMAiFFHWYYP.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

F5ZH09-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTNDLIMQAF EWYLPADSKH WQKLQASIPE LQKLGISKIW LPPAFKGTGT
60 70 80 90 100
NDVGYGIYDL FDLGEFDQNG TVPTKYGSKE EYLSLVSELN KAGIQPIADV
110 120 130 140 150
VLNHKANADQ KETFYVLKMN PENRQEPISE PYEIEGWTGF NFPGRKNKYN
160 170 180 190 200
NFKWHWYHFS GLDYDARNNE TGIYLIAGDN KGWADQETVD NEKGNFDYLM
210 220 230 240 250
FNDIDFKHPE VRQHLKDWTK WYISESQVKG FRLDAIKHID ASFMKEFITF
260 270 280 290 300
IQAEIDENFY IFGEYWKDDF DATEHYLELI DYKFDLFDVA LHMNFYQACQ
310 320 330 340 350
AGNNFDMRQI FDGSLVQTHP MHAITFVENH DTQKGQSLQS NIEDWFKPIA
360 370 380 390 400
YSLVMLRQDG LPCVFYGDYY GIEGDDFGQP SFKNDLDKLA FLRKEFAYGQ
410 420 430 440 450
EVDYFDHANC IGWTRLGDDE HQSALAVVVS NGDKGWKHME VGQLYAGQTF
460 470 480
VDYMGNSSEE MTIDENGWAD FHAQAGSVSA WVPKNKIK
Length:488
Mass (Da):56,595
Last modified:July 27, 2011 - v1
Checksum:i611593CAEF41C7E5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002471 Genomic DNA. Translation: AEF24790.1.
RefSeqiYP_004478462.1. NC_015558.1.

Genome annotation databases

EnsemblBacteriaiAEF24790; AEF24790; STP_0342.
GeneIDi10662895.
KEGGistk:STP_0342.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002471 Genomic DNA. Translation: AEF24790.1.
RefSeqiYP_004478462.1. NC_015558.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEF24790; AEF24790; STP_0342.
GeneIDi10662895.
KEGGistk:STP_0342.

Phylogenomic databases

KOiK01176.
OMAiFFHWYYP.

Enzyme and pathway databases

BioCyciSPAR936154:GHCN-375-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence and immunoproteomic analyses of the bacterial fish pathogen Streptococcus parauberis."
    Nho S.W., Hikima J.I., Cha I.S., Park S.B., Jang H.B., del Castillo C.S., Kondo H., Hirono I., Aoki T., Jung T.S.
    J. Bacteriol. 193:3356-3366(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: KCTC 11537Imported.

Entry informationi

Entry nameiF5ZH09_STRPW
AccessioniPrimary (citable) accession number: F5ZH09
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: February 4, 2015
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.