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Protein
Submitted name:

Glutamate decarboxylase putative

Gene

ambt_19515

Organism
Alteromonas sp. (strain SN2)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciASP715451:GHV1-3908-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Glutamate decarboxylase putativeImported
Gene namesi
Ordered Locus Names:ambt_19515Imported
OrganismiAlteromonas sp. (strain SN2)Imported
Taxonomic identifieri715451 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeAlteromonas
ProteomesiUP000000683 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi715451.ambt_19515.

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

KOiK01580.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

Sequencei

Sequence statusi: Complete.

F5ZFV3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGEAQVSLEH LFRVFTKPEH KDSKMAQIEQ HLSDNILDFL SQHVVTKKTS
60 70 80 90 100
LEEIEKDFSD SKVPESPEFV STHAESLLDK LVAHSVNTYS PTFIGHMTSA
110 120 130 140 150
LPYFHLPLSK LMVGLNQNLV KIETSKAFTP LERQVLGMMH NLVYDESKAF
160 170 180 190 200
YDSHLHSAKR SLGAFCSGGT IANITALWVA RNKILGPQEG FAGVAKAGLA
210 220 230 240 250
AAYRFHDINH LGVMCSKRGH YSLSKAVDAL GLGRDQLLSL PAPNQTLDPE
260 270 280 290 300
KALAAGKCYQ EEGNKLLAIV GVGGTTETGH VDPLNELADV AKELGCWFHV
310 320 330 340 350
DAAWGGATLF SSQYKHRLKG IERADSVTID AHKQMYVPMG AGMALFKNPE
360 370 380 390 400
DANAVRHHAQ YILRAGSKDL GATTLEGSRN GMAMMVYSAM HIFGRRGYEL
410 420 430 440 450
LIDRSIEKAG TFADMIAKHP DFELTTAPTL SLLTYRVCPA GLQEKLKHAD
460 470 480 490 500
EATKDKINEK LDRLTVIVQK QQREAGKSFV SRTRLEAPEY PTNCITVFRV
510 520 530 540
VLANPLTSTQ DLRNILNEQH VIATGTKLYK ELVKMIETIP VA
Length:542
Mass (Da):59,776
Last modified:July 27, 2011 - v1
Checksum:i96F6C61912D10860
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002339 Genomic DNA. Translation: AEF05394.1.
RefSeqiWP_013786305.1. NC_015554.1.
YP_004469196.1. NC_015554.1.

Genome annotation databases

EnsemblBacteriaiAEF05394; AEF05394; ambt_19515.
KEGGialt:ambt_19515.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002339 Genomic DNA. Translation: AEF05394.1.
RefSeqiWP_013786305.1. NC_015554.1.
YP_004469196.1. NC_015554.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi715451.ambt_19515.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEF05394; AEF05394; ambt_19515.
KEGGialt:ambt_19515.

Phylogenomic databases

KOiK01580.

Enzyme and pathway databases

BioCyciASP715451:GHV1-3908-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of the polycyclic aromatic hydrocarbon-degrading bacterium Alteromonas sp. strain SN2."
    Jin H.M., Jeong H., Moon E.J., Math R.K., Lee K., Kim H.J., Jeon C.O., Oh T.K., Kim J.F.
    J. Bacteriol. 193:4292-4293(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SN2Imported.

Entry informationi

Entry nameiF5ZFV3_ALTSS
AccessioniPrimary (citable) accession number: F5ZFV3
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: June 24, 2015
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.