F5ZFV3 (F5ZFV3_ALTSS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glutamate decarboxylase putative EMBL AEF05394.1

Gene names

Ordered Locus Names:

ambt_19515 EMBL AEF05394.1

Organism

Alteromonas sp. (strain SN2) [Complete proteome] [HAMAP]

Taxonomic identifier

715451 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Alteromonadaceae › Alteromonas

Protein attributes

Sequence length	542 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carboxylic acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	carboxy-lyase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F5ZFV3 [UniParc]. Last modified July 27, 2011. Version 1. Checksum: 96F6C61912D10860	FASTA	542	59,776
	10 20 30 40 50 60 MGEAQVSLEH LFRVFTKPEH KDSKMAQIEQ HLSDNILDFL SQHVVTKKTS LEEIEKDFSD 70 80 90 100 110 120 SKVPESPEFV STHAESLLDK LVAHSVNTYS PTFIGHMTSA LPYFHLPLSK LMVGLNQNLV 130 140 150 160 170 180 KIETSKAFTP LERQVLGMMH NLVYDESKAF YDSHLHSAKR SLGAFCSGGT IANITALWVA 190 200 210 220 230 240 RNKILGPQEG FAGVAKAGLA AAYRFHDINH LGVMCSKRGH YSLSKAVDAL GLGRDQLLSL 250 260 270 280 290 300 PAPNQTLDPE KALAAGKCYQ EEGNKLLAIV GVGGTTETGH VDPLNELADV AKELGCWFHV 310 320 330 340 350 360 DAAWGGATLF SSQYKHRLKG IERADSVTID AHKQMYVPMG AGMALFKNPE DANAVRHHAQ 370 380 390 400 410 420 YILRAGSKDL GATTLEGSRN GMAMMVYSAM HIFGRRGYEL LIDRSIEKAG TFADMIAKHP 430 440 450 460 470 480 DFELTTAPTL SLLTYRVCPA GLQEKLKHAD EATKDKINEK LDRLTVIVQK QQREAGKSFV 490 500 510 520 530 540 SRTRLEAPEY PTNCITVFRV VLANPLTSTQ DLRNILNEQH VIATGTKLYK ELVKMIETIP VA

References

[1]

"Complete genome sequence of the polycyclic aromatic hydrocarbon-degrading bacterium Alteromonas sp. strain SN2." Jin H.M., Jeong H., Moon E.J., Math R.K., Lee K., Kim H.J., Jeon C.O., Oh T.K., Kim J.F. J. Bacteriol. 193:4292-4293(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: SN2 EMBL AEF05394.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002339 Genomic DNA. Translation: AEF05394.1.
RefSeq	YP_004469196.1. NC_015554.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEF05394; AEF05394; ambt_19515.
GeneID	10650804.
KEGG	alt:ambt_19515.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01580.
Enzyme and pathway databases
BioCyc	ASP715451:GHV1-3904-MONOMER.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR022517. Asp_decarboxylase_pyridox. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNet	Search...

Entry information

Entry name

F5ZFV3_ALTSS

Accession

Primary (citable) accession number: F5ZFV3

Entry history

Integrated into UniProtKB/TrEMBL:	July 27, 2011
Last sequence update:	July 27, 2011
Last modified:	April 3, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)