Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

F5ZFV3 (F5ZFV3_ALTSS) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:ambt_19515 EMBL AEF05394.1
OrganismAlteromonas sp. (strain SN2) [Complete proteome] [HAMAP] EMBL AEF05394.1
Taxonomic identifier715451 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeAlteromonas

Protein attributes

Sequence length542 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
F5ZFV3 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: 96F6C61912D10860

FASTA54259,776
        10         20         30         40         50         60 
MGEAQVSLEH LFRVFTKPEH KDSKMAQIEQ HLSDNILDFL SQHVVTKKTS LEEIEKDFSD 

        70         80         90        100        110        120 
SKVPESPEFV STHAESLLDK LVAHSVNTYS PTFIGHMTSA LPYFHLPLSK LMVGLNQNLV 

       130        140        150        160        170        180 
KIETSKAFTP LERQVLGMMH NLVYDESKAF YDSHLHSAKR SLGAFCSGGT IANITALWVA 

       190        200        210        220        230        240 
RNKILGPQEG FAGVAKAGLA AAYRFHDINH LGVMCSKRGH YSLSKAVDAL GLGRDQLLSL 

       250        260        270        280        290        300 
PAPNQTLDPE KALAAGKCYQ EEGNKLLAIV GVGGTTETGH VDPLNELADV AKELGCWFHV 

       310        320        330        340        350        360 
DAAWGGATLF SSQYKHRLKG IERADSVTID AHKQMYVPMG AGMALFKNPE DANAVRHHAQ 

       370        380        390        400        410        420 
YILRAGSKDL GATTLEGSRN GMAMMVYSAM HIFGRRGYEL LIDRSIEKAG TFADMIAKHP 

       430        440        450        460        470        480 
DFELTTAPTL SLLTYRVCPA GLQEKLKHAD EATKDKINEK LDRLTVIVQK QQREAGKSFV 

       490        500        510        520        530        540 
SRTRLEAPEY PTNCITVFRV VLANPLTSTQ DLRNILNEQH VIATGTKLYK ELVKMIETIP 


VA 

« Hide

References

[1]"Complete genome sequence of the polycyclic aromatic hydrocarbon-degrading bacterium Alteromonas sp. strain SN2."
Jin H.M., Jeong H., Moon E.J., Math R.K., Lee K., Kim H.J., Jeon C.O., Oh T.K., Kim J.F.
J. Bacteriol. 193:4292-4293(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: SN2 EMBL AEF05394.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002339 Genomic DNA. Translation: AEF05394.1.
RefSeqYP_004469196.1. NC_015554.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEF05394; AEF05394; ambt_19515.
GeneID10650804.
KEGGalt:ambt_19515.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01580.

Enzyme and pathway databases

BioCycASP715451:GHV1-3908-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF5ZFV3_ALTSS
AccessionPrimary (citable) accession number: F5ZFV3
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: October 16, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)