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F5ZEK7

- F5ZEK7_ALTSS

UniProt

F5ZEK7 - F5ZEK7_ALTSS

Protein
Submitted name:

DNA ligase

Gene

ambt_14835

Organism
Alteromonas sp. (strain SN2)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 17 (01 Oct 2014)
      Sequence version 1 (27 Jul 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciASP715451:GHV1-2983-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligaseImported (EC:6.5.1.1Imported)
    Gene namesi
    Ordered Locus Names:ambt_14835Imported
    OrganismiAlteromonas sp. (strain SN2)Imported
    Taxonomic identifieri715451 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeAlteromonas
    ProteomesiUP000000683: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliF5ZEK7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    F5ZEK7-1 [UniParc]FASTAAdd to Basket

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    MNIKYVISIL LLAISQPTVS FATPVATPVA TPVTYLTSDT TEPMSDFAKP    50
    ISDAAKPMAN VAKPLFSPIK PVTEQGVMPI QLAATYNKSD YINIAEYLVS 100
    EKLDGVRARW TGTQLLTRNG NKIHAPEWFT KNWPDVALDG ELWTQRSSFE 150
    AIASIVLSHT PDERWRTVKM MLFDMPVSHV PFATRLSTME ALVKQANSNS 200
    LTTIPQFTLD SQRLLEAKID EVTAKGGEGL MLHHKAAFYQ DGRSNQLLKA 250
    KRFNDAEAKV VGYVKGKGKF AGMMGSLMVE TPEGVQFKIG TGFSMKQRRY 300
    PPPMNSWITF KYFGVTKKGI PRFASFRHVR PDKDLPDL 338
    Length:338
    Mass (Da):37,693
    Last modified:July 27, 2011 - v1
    Checksum:i31E66CCE029A821D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002339 Genomic DNA. Translation: AEF04477.1.
    RefSeqiWP_013785402.1. NC_015554.1.
    YP_004468279.1. NC_015554.1.

    Genome annotation databases

    EnsemblBacteriaiAEF04477; AEF04477; ambt_14835.
    GeneIDi10651426.
    KEGGialt:ambt_14835.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002339 Genomic DNA. Translation: AEF04477.1 .
    RefSeqi WP_013785402.1. NC_015554.1.
    YP_004468279.1. NC_015554.1.

    3D structure databases

    ProteinModelPortali F5ZEK7.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEF04477 ; AEF04477 ; ambt_14835 .
    GeneIDi 10651426.
    KEGGi alt:ambt_14835.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci ASP715451:GHV1-2983-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of the polycyclic aromatic hydrocarbon-degrading bacterium Alteromonas sp. strain SN2."
      Jin H.M., Jeong H., Moon E.J., Math R.K., Lee K., Kim H.J., Jeon C.O., Oh T.K., Kim J.F.
      J. Bacteriol. 193:4292-4293(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: SN2Imported.

    Entry informationi

    Entry nameiF5ZEK7_ALTSS
    AccessioniPrimary (citable) accession number: F5ZEK7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 27, 2011
    Last sequence update: July 27, 2011
    Last modified: October 1, 2014
    This is version 17 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3