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F5ZEK7 (F5ZEK7_ALTSS) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=6.5.1.1 EMBL AEF04477.1
Gene names
Ordered Locus Names:ambt_14835 EMBL AEF04477.1
OrganismAlteromonas sp. (strain SN2) [Complete proteome] [HAMAP] EMBL AEF04477.1
Taxonomic identifier715451 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeAlteromonas

Protein attributes

Sequence length338 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AEF04477.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F5ZEK7 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: 31E66CCE029A821D

FASTA33837,693
        10         20         30         40         50         60 
MNIKYVISIL LLAISQPTVS FATPVATPVA TPVTYLTSDT TEPMSDFAKP ISDAAKPMAN 

        70         80         90        100        110        120 
VAKPLFSPIK PVTEQGVMPI QLAATYNKSD YINIAEYLVS EKLDGVRARW TGTQLLTRNG 

       130        140        150        160        170        180 
NKIHAPEWFT KNWPDVALDG ELWTQRSSFE AIASIVLSHT PDERWRTVKM MLFDMPVSHV 

       190        200        210        220        230        240 
PFATRLSTME ALVKQANSNS LTTIPQFTLD SQRLLEAKID EVTAKGGEGL MLHHKAAFYQ 

       250        260        270        280        290        300 
DGRSNQLLKA KRFNDAEAKV VGYVKGKGKF AGMMGSLMVE TPEGVQFKIG TGFSMKQRRY 

       310        320        330 
PPPMNSWITF KYFGVTKKGI PRFASFRHVR PDKDLPDL 

« Hide

References

[1]"Complete genome sequence of the polycyclic aromatic hydrocarbon-degrading bacterium Alteromonas sp. strain SN2."
Jin H.M., Jeong H., Moon E.J., Math R.K., Lee K., Kim H.J., Jeon C.O., Oh T.K., Kim J.F.
J. Bacteriol. 193:4292-4293(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: SN2 EMBL AEF04477.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002339 Genomic DNA. Translation: AEF04477.1.
RefSeqYP_004468279.1. NC_015554.1.

3D structure databases

ProteinModelPortalF5ZEK7.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEF04477; AEF04477; ambt_14835.
GeneID10651426.
KEGGalt:ambt_14835.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycASP715451:GHV1-2983-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF5ZEK7_ALTSS
AccessionPrimary (citable) accession number: F5ZEK7
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: June 11, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)