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Protein
Submitted name:

DNA ligase

Gene

ambt_14835

Organism
Alteromonas naphthalenivorans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:ambt_14835Imported
OrganismiAlteromonas naphthalenivoransImported
Taxonomic identifieri715451 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeAlteromonas
Proteomesi
  • UP000000683 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 22Sequence analysisAdd BLAST22
ChainiPRO_500333058423 – 338Sequence analysisAdd BLAST316

Interactioni

Protein-protein interaction databases

STRINGi715451.ambt_14835.

Structurei

3D structure databases

ProteinModelPortaliF5ZEK7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini96 – 251DNA_LIGASE_A3InterPro annotationAdd BLAST156
Domaini265 – 330DNA_ligase_OB_2InterPro annotationAdd BLAST66

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105E1T. Bacteria.
COG1793. LUCA.
KOiK10747.
OMAiVRGYWDG.
OrthoDBiPOG091H05UG.

Family and domain databases

InterProiView protein in InterPro
IPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
PfamiView protein in Pfam
PF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
SUPFAMiSSF50249. SSF50249. 1 hit.

Sequencei

Sequence statusi: Complete.

F5ZEK7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNIKYVISIL LLAISQPTVS FATPVATPVA TPVTYLTSDT TEPMSDFAKP
60 70 80 90 100
ISDAAKPMAN VAKPLFSPIK PVTEQGVMPI QLAATYNKSD YINIAEYLVS
110 120 130 140 150
EKLDGVRARW TGTQLLTRNG NKIHAPEWFT KNWPDVALDG ELWTQRSSFE
160 170 180 190 200
AIASIVLSHT PDERWRTVKM MLFDMPVSHV PFATRLSTME ALVKQANSNS
210 220 230 240 250
LTTIPQFTLD SQRLLEAKID EVTAKGGEGL MLHHKAAFYQ DGRSNQLLKA
260 270 280 290 300
KRFNDAEAKV VGYVKGKGKF AGMMGSLMVE TPEGVQFKIG TGFSMKQRRY
310 320 330
PPPMNSWITF KYFGVTKKGI PRFASFRHVR PDKDLPDL
Length:338
Mass (Da):37,693
Last modified:July 27, 2011 - v1
Checksum:i31E66CCE029A821D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002339 Genomic DNA. Translation: AEF04477.1.
RefSeqiWP_013785402.1. NC_015554.1.

Genome annotation databases

EnsemblBacteriaiAEF04477; AEF04477; ambt_14835.
KEGGialt:ambt_14835.

Similar proteinsi

Entry informationi

Entry nameiF5ZEK7_ALTNA
AccessioniPrimary (citable) accession number: F5ZEK7
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: September 27, 2017
This is version 35 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported