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F5Z778

- F5Z778_ALTSS

UniProt

F5Z778 - F5Z778_ALTSS

Protein

Choline dehydrogenase

Gene

ambt_06940

Organism
Alteromonas sp. (strain SN2)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 17 (01 Oct 2014)
      Sequence version 1 (27 Jul 2011)
      Previous versions | rss
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    Functioni

    Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.SAAS annotation

    Catalytic activityi

    Betaine aldehyde + NAD+ + H2O = betaine + NADH.SAAS annotation
    Choline + acceptor = betaine aldehyde + reduced acceptor.SAAS annotation

    Cofactori

    FAD.SAAS annotation

    Pathwayi

    GO - Molecular functioni

    1. choline dehydrogenase activity Source: UniProtKB-EC
    2. flavin adenine dinucleotide binding Source: InterPro

    GO - Biological processi

    1. glycine betaine biosynthetic process from choline Source: UniProtKB-UniPathway

    Keywords - Molecular functioni

    OxidoreductaseSAAS annotationImported

    Keywords - Ligandi

    FADUniRule annotationSAAS annotation, Flavoprotein, NADSAAS annotation

    Enzyme and pathway databases

    BioCyciASP715451:GHV1-1389-MONOMER.
    UniPathwayiUPA00529; UER00385.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Choline dehydrogenaseUniRule annotation (EC:1.1.99.1UniRule annotation)
    Gene namesi
    Ordered Locus Names:ambt_06940Imported
    OrganismiAlteromonas sp. (strain SN2)Imported
    Taxonomic identifieri715451 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeAlteromonas
    ProteomesiUP000000683: Chromosome

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the GMC oxidoreductase family.UniRule annotation

    Phylogenomic databases

    KOiK00108.

    Family and domain databases

    InterProiIPR011533. BetA.
    IPR012132. GMC_OxRdtase.
    IPR000172. GMC_OxRdtase_N.
    IPR007867. GMC_OxRtase_C.
    [Graphical view]
    PfamiPF05199. GMC_oxred_C. 1 hit.
    PF00732. GMC_oxred_N. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000137. Alcohol_oxidase. 1 hit.
    TIGRFAMsiTIGR01810. betA. 1 hit.
    PROSITEiPS00623. GMC_OXRED_1. 1 hit.
    PS00624. GMC_OXRED_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F5Z778-1 [UniParc]FASTAAdd to Basket

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    MSKQAYDYII VGAGSAGCVL ANRLSEDANN NVLLLETGGS DKSIFIKMPT    50
    ALSIPMNTDK YAWQFHTEEE PFLDNRKMHC PRGKVLGGSS SINGMVYVRG 100
    HAKDFDEWEE HGAQGWNYQA CLPYFQKAES FYLGNDDYRG GKGPLGVNNG 150
    NEMANPLYTA FIEAGKEAGY ATTADYNAAQ QEGFGPMHMT VKDGVRSSAS 200
    REYLDPVKSR KNLTLVTGAL AEKVILEGKK AVGVQYSVNG KRVTAKANKE 250
    VVLSAGSIGS PHLLQLSGIG DSETLKAAGV DVKHHLPGVG QNLQDHLEFY 300
    FQYKCKQPIT LNGKLGLISK GLIGARWMFT RKGLGATNHF ESCAFIRSKP 350
    GVEWPDIQYH FLPAAMRYDG LSAFDGHGFQ VHVGHNKPKS RGAVTIKTAN 400
    PTDAPKIQFN YLQHQDDIEG FRACVRLTRE IIEQSAFDDY REDEIQPGKH 450
    IQTDEEIDAF VRQAVESAYH PSCSCKMGED AMAVVNSNTQ VHGIESLRVV 500
    DSSIFPTVPN GNLNAPTIMV AEKAADLILG KPALAHSPVN VATSNNWETV 550
    QRNSTI 556
    Length:556
    Mass (Da):60,849
    Last modified:July 27, 2011 - v1
    Checksum:iFE454CC1D0FF49A9
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002339 Genomic DNA. Translation: AEF02921.1.
    RefSeqiWP_013783861.1. NC_015554.1.
    YP_004466723.1. NC_015554.1.

    Genome annotation databases

    EnsemblBacteriaiAEF02921; AEF02921; ambt_06940.
    GeneIDi10654551.
    KEGGialt:ambt_06940.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002339 Genomic DNA. Translation: AEF02921.1 .
    RefSeqi WP_013783861.1. NC_015554.1.
    YP_004466723.1. NC_015554.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEF02921 ; AEF02921 ; ambt_06940 .
    GeneIDi 10654551.
    KEGGi alt:ambt_06940.

    Phylogenomic databases

    KOi K00108.

    Enzyme and pathway databases

    UniPathwayi UPA00529 ; UER00385 .
    BioCyci ASP715451:GHV1-1389-MONOMER.

    Family and domain databases

    InterProi IPR011533. BetA.
    IPR012132. GMC_OxRdtase.
    IPR000172. GMC_OxRdtase_N.
    IPR007867. GMC_OxRtase_C.
    [Graphical view ]
    Pfami PF05199. GMC_oxred_C. 1 hit.
    PF00732. GMC_oxred_N. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000137. Alcohol_oxidase. 1 hit.
    TIGRFAMsi TIGR01810. betA. 1 hit.
    PROSITEi PS00623. GMC_OXRED_1. 1 hit.
    PS00624. GMC_OXRED_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of the polycyclic aromatic hydrocarbon-degrading bacterium Alteromonas sp. strain SN2."
      Jin H.M., Jeong H., Moon E.J., Math R.K., Lee K., Kim H.J., Jeon C.O., Oh T.K., Kim J.F.
      J. Bacteriol. 193:4292-4293(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: SN2Imported.

    Entry informationi

    Entry nameiF5Z778_ALTSS
    AccessioniPrimary (citable) accession number: F5Z778
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 27, 2011
    Last sequence update: July 27, 2011
    Last modified: October 1, 2014
    This is version 17 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3