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F5Z778

- F5Z778_ALTSS

UniProt

F5Z778 - F5Z778_ALTSS

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Protein
Choline dehydrogenase
Gene
ambt_06940
Organism
Alteromonas sp. (strain SN2)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate By similarity.SAAS annotations

Catalytic activityi

Betaine aldehyde + NAD+ + H2O = betaine + NADH.SAAS annotations
Choline + acceptor = betaine aldehyde + reduced acceptor.SAAS annotations

Cofactori

FAD By similarity.SAAS annotations

Pathwayi

GO - Molecular functioni

  1. choline dehydrogenase activity Source: UniProtKB-EC
  2. flavin adenine dinucleotide binding Source: InterPro

GO - Biological processi

  1. glycine betaine biosynthetic process from choline Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseSAAS annotationsImported

Keywords - Ligandi

FADUniRule annotationSAAS annotations, Flavoprotein, NADSAAS annotations

Enzyme and pathway databases

BioCyciASP715451:GHV1-1389-MONOMER.
UniPathwayiUPA00529; UER00385.

Names & Taxonomyi

Protein namesi
Recommended name:
Choline dehydrogenaseUniRule annotation (EC:1.1.99.1UniRule annotation)
Gene namesi
Ordered Locus Names:ambt_06940Imported
OrganismiAlteromonas sp. (strain SN2)Imported
Taxonomic identifieri715451 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeAlteromonas
ProteomesiUP000000683: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the GMC oxidoreductase family.UniRule annotation

Phylogenomic databases

KOiK00108.

Family and domain databases

InterProiIPR011533. BetA.
IPR012132. GMC_OxRdtase.
IPR000172. GMC_OxRdtase_N.
IPR007867. GMC_OxRtase_C.
[Graphical view]
PfamiPF05199. GMC_oxred_C. 1 hit.
PF00732. GMC_oxred_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000137. Alcohol_oxidase. 1 hit.
TIGRFAMsiTIGR01810. betA. 1 hit.
PROSITEiPS00623. GMC_OXRED_1. 1 hit.
PS00624. GMC_OXRED_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F5Z778-1 [UniParc]FASTAAdd to Basket

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MSKQAYDYII VGAGSAGCVL ANRLSEDANN NVLLLETGGS DKSIFIKMPT    50
ALSIPMNTDK YAWQFHTEEE PFLDNRKMHC PRGKVLGGSS SINGMVYVRG 100
HAKDFDEWEE HGAQGWNYQA CLPYFQKAES FYLGNDDYRG GKGPLGVNNG 150
NEMANPLYTA FIEAGKEAGY ATTADYNAAQ QEGFGPMHMT VKDGVRSSAS 200
REYLDPVKSR KNLTLVTGAL AEKVILEGKK AVGVQYSVNG KRVTAKANKE 250
VVLSAGSIGS PHLLQLSGIG DSETLKAAGV DVKHHLPGVG QNLQDHLEFY 300
FQYKCKQPIT LNGKLGLISK GLIGARWMFT RKGLGATNHF ESCAFIRSKP 350
GVEWPDIQYH FLPAAMRYDG LSAFDGHGFQ VHVGHNKPKS RGAVTIKTAN 400
PTDAPKIQFN YLQHQDDIEG FRACVRLTRE IIEQSAFDDY REDEIQPGKH 450
IQTDEEIDAF VRQAVESAYH PSCSCKMGED AMAVVNSNTQ VHGIESLRVV 500
DSSIFPTVPN GNLNAPTIMV AEKAADLILG KPALAHSPVN VATSNNWETV 550
QRNSTI 556
Length:556
Mass (Da):60,849
Last modified:July 27, 2011 - v1
Checksum:iFE454CC1D0FF49A9
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002339 Genomic DNA. Translation: AEF02921.1.
RefSeqiWP_013783861.1. NC_015554.1.
YP_004466723.1. NC_015554.1.

Genome annotation databases

EnsemblBacteriaiAEF02921; AEF02921; ambt_06940.
GeneIDi10654551.
KEGGialt:ambt_06940.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002339 Genomic DNA. Translation: AEF02921.1 .
RefSeqi WP_013783861.1. NC_015554.1.
YP_004466723.1. NC_015554.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEF02921 ; AEF02921 ; ambt_06940 .
GeneIDi 10654551.
KEGGi alt:ambt_06940.

Phylogenomic databases

KOi K00108.

Enzyme and pathway databases

UniPathwayi UPA00529 ; UER00385 .
BioCyci ASP715451:GHV1-1389-MONOMER.

Family and domain databases

InterProi IPR011533. BetA.
IPR012132. GMC_OxRdtase.
IPR000172. GMC_OxRdtase_N.
IPR007867. GMC_OxRtase_C.
[Graphical view ]
Pfami PF05199. GMC_oxred_C. 1 hit.
PF00732. GMC_oxred_N. 1 hit.
[Graphical view ]
PIRSFi PIRSF000137. Alcohol_oxidase. 1 hit.
TIGRFAMsi TIGR01810. betA. 1 hit.
PROSITEi PS00623. GMC_OXRED_1. 1 hit.
PS00624. GMC_OXRED_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of the polycyclic aromatic hydrocarbon-degrading bacterium Alteromonas sp. strain SN2."
    Jin H.M., Jeong H., Moon E.J., Math R.K., Lee K., Kim H.J., Jeon C.O., Oh T.K., Kim J.F.
    J. Bacteriol. 193:4292-4293(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SN2Imported.

Entry informationi

Entry nameiF5Z778_ALTSS
AccessioniPrimary (citable) accession number: F5Z778
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: September 3, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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