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F5Z238

- F5Z238_MYCSD

UniProt

F5Z238 - F5Z238_MYCSD

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Protein
Submitted name:

Putative DNA ligase-like protein

Gene

JDM601_3038

Organism
Mycobacterium sp. (strain JDM601)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ligase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMSP875328:GHLX-3082-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative DNA ligase-like proteinImported
Gene namesi
Ordered Locus Names:JDM601_3038Imported
OrganismiMycobacterium sp. (strain JDM601)Imported
Taxonomic identifieri875328 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium
ProteomesiUP000009224: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

InterProiIPR014145. LigD_pol.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

Sequencei

Sequence statusi: Complete.

F5Z238-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MKPNVSITHP DRVLFPASDT HEAITKGDLI DYYAELAPVM VPHLDGRPLT
60 70 80 90 100
LTRFPGGIDE EGFIQQNFAA ALPDWMDRVE VARKSGEGTV VHPVVTREEA
110 120 130 140 150
LVWAANQDCI TLHSWSSRRP HLDTPDRLIF DLDPADDDFA VVRATARSVA
160 170 180 190 200
DVVQELGMTA YVQTTGSRGL HIVAPLRGDA DFDTAREFAS TIAGLVVDDD
210 220 230 240 250
PLHRTREIRK AGRGGRVYVD VMRNAYGQTG VAPYAVRARA GAPVALPLEW
260 270 280 290 300
DELDIPGIRP DGWTLRDVPK RMCERGDPWA DMYRQACALA PLRDRLAKLG

A
Length:301
Mass (Da):33,225
Last modified:July 27, 2011 - v1
Checksum:iC6E405E53C9814BD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002329 Genomic DNA. Translation: AEF37038.1.
RefSeqiWP_013829967.1. NC_015576.1.
YP_004524292.1. NC_015576.1.

Genome annotation databases

EnsemblBacteriaiAEF37038; AEF37038; JDM601_3038.
GeneIDi10685071.
KEGGimjd:JDM601_3038.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002329 Genomic DNA. Translation: AEF37038.1 .
RefSeqi WP_013829967.1. NC_015576.1.
YP_004524292.1. NC_015576.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEF37038 ; AEF37038 ; JDM601_3038 .
GeneIDi 10685071.
KEGGi mjd:JDM601_3038.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci MSP875328:GHLX-3082-MONOMER.

Family and domain databases

InterProi IPR014145. LigD_pol.
[Graphical view ]
TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete gnome sequence of a novel clinical isolate, the nontuberculous Mycobacterium strain JDM601."
    Zhang Z.Y., Sun Z.Q., Wang Z.L., Wen Z.L., Sun Q.W., Zhu Z.Q., Song Y.Z., Zhao J.W., Wang H.H., Zhang S.L., Guo X.K.
    J. Bacteriol. 193:4300-4301(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JDM601Imported.

Entry informationi

Entry nameiF5Z238_MYCSD
AccessioniPrimary (citable) accession number: F5Z238
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: October 1, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3