F5Z238 (F5Z238_MYCSD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative DNA ligase-like protein EMBL AEF37038.1

Gene names

Ordered Locus Names:

JDM601_3038 EMBL AEF37038.1

Organism

Mycobacterium sp. (strain JDM601) [Complete proteome] [HAMAP]

Taxonomic identifier

875328 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Mycobacterium

Protein attributes

Sequence length	301 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL AEF37038.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	ligase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F5Z238 [UniParc]. Last modified July 27, 2011. Version 1. Checksum: C6E405E53C9814BD	FASTA	301	33,225
	10 20 30 40 50 60 MKPNVSITHP DRVLFPASDT HEAITKGDLI DYYAELAPVM VPHLDGRPLT LTRFPGGIDE 70 80 90 100 110 120 EGFIQQNFAA ALPDWMDRVE VARKSGEGTV VHPVVTREEA LVWAANQDCI TLHSWSSRRP 130 140 150 160 170 180 HLDTPDRLIF DLDPADDDFA VVRATARSVA DVVQELGMTA YVQTTGSRGL HIVAPLRGDA 190 200 210 220 230 240 DFDTAREFAS TIAGLVVDDD PLHRTREIRK AGRGGRVYVD VMRNAYGQTG VAPYAVRARA 250 260 270 280 290 300 GAPVALPLEW DELDIPGIRP DGWTLRDVPK RMCERGDPWA DMYRQACALA PLRDRLAKLG A

References

[1]

"Complete gnome sequence of a novel clinical isolate, the nontuberculous Mycobacterium strain JDM601." Zhang Z.Y., Sun Z.Q., Wang Z.L., Wen Z.L., Sun Q.W., Zhu Z.Q., Song Y.Z., Zhao J.W., Wang H.H., Zhang S.L., Guo X.K. J. Bacteriol. 193:4300-4301(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: JDM601 EMBL AEF37038.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002329 Genomic DNA. Translation: AEF37038.1.
RefSeq	YP_004524292.1. NC_015576.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEF37038; AEF37038; JDM601_3038.
GeneID	10685071.
KEGG	mjd:JDM601_3038.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01971.
Enzyme and pathway databases
BioCyc	MSP875328:GHLX-3039-MONOMER.
Family and domain databases
InterPro	IPR014145. LigD_pol. [Graphical view]
TIGRFAMs	TIGR02778. ligD_pol. 1 hit.
ProtoNet	Search...

Entry information

Entry name

F5Z238_MYCSD

Accession

Primary (citable) accession number: F5Z238

Entry history

Integrated into UniProtKB/TrEMBL:	July 27, 2011
Last sequence update:	July 27, 2011
Last modified:	April 3, 2013
This is version 8 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)