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F5YZQ3 (F5YZQ3_MYCSD) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:aspC EMBL AEF34329.1
Ordered Locus Names:JDM601_0329 EMBL AEF34329.1
OrganismMycobacterium sp. (strain JDM601) [Complete proteome] [HAMAP] EMBL AEF34329.1
Taxonomic identifier875328 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium

Protein attributes

Sequence length425 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionAminotransferase EMBL AEF34329.1
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processbiosynthetic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionpyridoxal phosphate binding

Inferred from electronic annotation. Source: InterPro

transaminase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F5YZQ3 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: 72E800D95C23C73D

FASTA42546,907
        10         20         30         40         50         60 
MTAHQLPHQM PWPAIGSQLR QRTFAQSTKL QDVLYEIRGP IHAQAARMEA EGHRILKLNI 

        70         80         90        100        110        120 
GNPAPFGFEA PDVIMRDMIQ ALPHAQGYSD SQGILPARRA VVTRYELVEG FPRFDVDDVY 

       130        140        150        160        170        180 
LGNGVSELIS MVLQALLDNG DQVLIPAPDY PLWTASTSLA GGTPVHYLCD ETQGWQPDIA 

       190        200        210        220        230        240 
DMESKITERT KALVVINPNN PTGAVYGREV LSQIAELARK HQLLLLADEI YDKILYDDAE 

       250        260        270        280        290        300 
HTNMAALAPD LLCLTFNGLS KAYRVAGYRA GWVAITGPKE HATSFLEGIN LLANMRLCPN 

       310        320        330        340        350        360 
VPAQHAIQVA LGGHQSIDDL VLPGGRLLEQ RDVAWSKLNE IPGVSCVKPS GALYAFPRLD 

       370        380        390        400        410        420 
PEVYPIQDDE QLVLDLLLQE KILVTQGTGF NWPAPDHLRI VTLPWARDLS GAIERLGNFL 


VGYRL 

« Hide

References

[1]"Complete genome sequence of a novel clinical isolate, the nontuberculous Mycobacterium strain JDM601."
Zhang Z.Y., Sun Z.Q., Wang Z.L., Wen Z.L., Sun Q.W., Zhu Z.Q., Song Y.Z., Zhao J.W., Wang H.H., Zhang S.L., Guo X.K.
J. Bacteriol. 193:4300-4301(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JDM601 EMBL AEF34329.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002329 Genomic DNA. Translation: AEF34329.1.
RefSeqYP_004521583.1. NC_015576.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEF34329; AEF34329; JDM601_0329.
GeneID10682323.
KEGGmjd:JDM601_0329.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK14260.

Enzyme and pathway databases

BioCycMSP875328:GHLX-334-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF5YZQ3_MYCSD
AccessionPrimary (citable) accession number: F5YZQ3
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: October 16, 2013
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)