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Protein
Submitted name:

ATP dependent DNA ligase

Gene

JDM601_0881

Organism
Mycobacterium sinense (strain JDM601)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseImported

Enzyme and pathway databases

BioCyciMSP875328:G1GXT-905-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:JDM601_0881Imported
OrganismiMycobacterium sinense (strain JDM601)Imported
Taxonomic identifieri875328 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycobacteriumMycobacterium terrae complex
Proteomesi
  • UP000009224 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi875328.JDM601_0881

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini547 – 669DNA_LIGASE_A3InterPro annotationAdd BLAST123

Phylogenomic databases

eggNOGiENOG4105DQE Bacteria
COG1793 LUCA
COG3285 LUCA
KOiK01971
OMAiAAPRTWD
OrthoDBiPOG091H0AZ9

Family and domain databases

CDDicd04863 MtLigD_Pol_like, 1 hit
InterProiView protein in InterPro
IPR012309 DNA_ligase_ATP-dep_C
IPR012310 DNA_ligase_ATP-dep_cent
IPR014146 LigD_ligase_dom
IPR014144 LigD_PE_domain
IPR014145 LigD_pol_dom
IPR033649 MtLigD_Pol-like
IPR012340 NA-bd_OB-fold
PfamiView protein in Pfam
PF04679 DNA_ligase_A_C, 1 hit
PF01068 DNA_ligase_A_M, 1 hit
PF13298 LigD_N, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR02777 LigD_PE_dom, 1 hit
TIGR02778 ligD_pol, 1 hit
TIGR02779 NHEJ_ligase_lig, 1 hit
PROSITEiView protein in PROSITE
PS50160 DNA_LIGASE_A3, 1 hit

Sequencei

Sequence statusi: Complete.

F5YT53-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAQPFQTRV KLTNADKVLY PATGTTKAQV YHYYTRIAEV MLPHIAGRPV
60 70 80 90 100
TRKRWPNGVA QDSFFEKQLA SSAPAWLPRA EVQHRSGITA YPIIDDLDGL
110 120 130 140 150
AWIAQQAALE VHVPQWRFEA EWTGGGRVLK PGPASRLVFD LDPGEGVSMS
160 170 180 190 200
QLAQVARAIR DLMAELDLDT FPVTSGSKGI HVYAALDRPV ASAGAVAVAK
210 220 230 240 250
RVAQQLESAM PKLVTATMAK KLRAGKVFVD WSQNNASKTT IAPYSLRGRD
260 270 280 290 300
HPTVAAPRSW AELDDPDLRQ LRFDEVLERV EHDGDLLAGL DGPLEGQDRL
310 320 330 340 350
AVYRAKRDAG RTPEPVPAAA PAAGEGNSFV IQEHHARRLH YDFRLERDGV
360 370 380 390 400
LVSWAVPKNL PTTTSVNHLA VRTEDHPLEY GGFEGTIPKG EYGAGTVRIW
410 420 430 440 450
DSGSYVTEKW QDTSEKGEVI VVLRGDRISG RYALIRTGGD QWLAHRMKDQ
460 470 480 490 500
QTFAFTDLAP MLATHGSVSG LDPKVWAFEG KWDGYRLLVE ADRGRVRLRA
510 520 530 540 550
RSGRDVTGEY PQLQTLAAEL TEHHVVLDGE VVALDAAGVP SFAAMQNSAR
560 570 580 590 600
STRVKFWAFD LLYLDGRPLL RAAYRDRRRL LATLAQGTGL VVKDLLAAGG
610 620 630 640 650
AEALEQSRRL GWEGVIAKKW DSPYQPGRRS PAWVKDKHWR TQEVVIGGWR
660 670 680 690 700
AGEGARGGGI GSLLMGIPEG DGLRFVGRVG TGFTERALAA LKKELTPTDE
710 720 730 740 750
SPFDAPLPRA DAKGVTFVRP TLVGEVRYSE RTADGRLRQP SWRGLRPDKT

PDDVVSED
Length:758
Mass (Da):83,365
Last modified:July 27, 2011 - v1
Checksum:i271D73726A939AE0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002329 Genomic DNA Translation: AEF34881.1
RefSeqiWP_013827823.1, NC_015576.1

Genome annotation databases

EnsemblBacteriaiAEF34881; AEF34881; JDM601_0881
KEGGimjd:JDM601_0881

Similar proteinsi

Entry informationi

Entry nameiF5YT53_MYCSD
AccessioniPrimary (citable) accession number: F5YT53
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: April 25, 2018
This is version 35 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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