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Protein
Submitted name:

Uncharacterized protein

Gene

JDM601_4022

Organism
Mycobacterium sp. (strain JDM601)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA primase activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciMSP875328:GHLX-4070-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:JDM601_4022Imported
OrganismiMycobacterium sp. (strain JDM601)Imported
Taxonomic identifieri875328 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium
ProteomesiUP000009224: Chromosome

Family & Domainsi

Family and domain databases

InterProiIPR002755. DNA_primase_S.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F5YT33-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPAGDSAEEL DVDGTAVRFT SGDKVYFPRL GAGGTKRALA DYYLTVANGP
60 70 80 90 100
LLQALADRPT HLQRFPDGIQ GAEVYQKRLP RGHPDYLQSC RVTFPSGRTA
110 120 130 140 150
DALKVTRPAD ILWAVQMSTV TFHPWPVRCG DTDHPDELRI DLDPQPGTGF
160 170 180 190 200
AEARAVALEV LRPLLDELGL VGYVKTSGGR GLHVFLRIKT DWDFIEVRRA
210 220 230 240 250
GIALARELER RAPEAVTSSW WKEERGKRIF IDFNQNARDR TMASAYSVRA
260 270 280 290 300
TPIATVSMPL TWDGLAEGAD PDDYTIATVP DLIARRGDAW ETIDGLEQSL
310 320 330 340 350
QPLLEMVAAD EARGLGDLPY PPNYPKMPGE PPRVQPSKQV AEHWDDKGNR

R
Length:351
Mass (Da):38,923
Last modified:July 27, 2011 - v1
Checksum:iB3751FB7717C0EE0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002329 Genomic DNA. Translation: AEF38022.1.
RefSeqiWP_013830943.1. NC_015576.1.
YP_004525276.1. NC_015576.1.

Genome annotation databases

EnsemblBacteriaiAEF38022; AEF38022; JDM601_4022.
GeneIDi10686059.
KEGGimjd:JDM601_4022.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002329 Genomic DNA. Translation: AEF38022.1.
RefSeqiWP_013830943.1. NC_015576.1.
YP_004525276.1. NC_015576.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEF38022; AEF38022; JDM601_4022.
GeneIDi10686059.
KEGGimjd:JDM601_4022.

Enzyme and pathway databases

BioCyciMSP875328:GHLX-4070-MONOMER.

Family and domain databases

InterProiIPR002755. DNA_primase_S.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete gnome sequence of a novel clinical isolate, the nontuberculous Mycobacterium strain JDM601."
    Zhang Z.Y., Sun Z.Q., Wang Z.L., Wen Z.L., Sun Q.W., Zhu Z.Q., Song Y.Z., Zhao J.W., Wang H.H., Zhang S.L., Guo X.K.
    J. Bacteriol. 193:4300-4301(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JDM601Imported.

Entry informationi

Entry nameiF5YT33_MYCSD
AccessioniPrimary (citable) accession number: F5YT33
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: March 4, 2015
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.