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F5YNN0 (F5YNN0_TREPZ) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.2.1.21 EMBL AEF84550.1
Gene names
Ordered Locus Names:TREPR_2952 EMBL AEF84550.1
OrganismTreponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2) [Complete proteome] [HAMAP] EMBL AEF84550.1
Taxonomic identifier545694 [NCBI]
Taxonomic lineageBacteriaSpirochaetesSpirochaetalesSpirochaetaceaeTreponema

Protein attributes

Sequence length476 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 1 family. RuleBase RU003690

Ontologies

Keywords
   Molecular functionGlycosidase RuleBase RU004468 EMBL AEF84550.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionbeta-glucosidase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F5YNN0 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: BC64F007C22A2996

FASTA47653,382
        10         20         30         40         50         60 
MAFPKNFLWG GAIAAHQAEG AYLEGGKSLA TCDVIHGGKG RIAEILDPAA IKTNIAKQEG 

        70         80         90        100        110        120 
YFPEHIAVDF YHHYKEDIAL FAEMGFKVFR TSISWARIFP NGDGDPNEAG LAFYDSMFDE 

       130        140        150        160        170        180 
CAKHGIEPLV TLSHWEMPVS LTTKYNGWAS REIIPLFERY ARTVLTRYKN KVRYWLTFNE 

       190        200        210        220        230        240 
INMTLHMPFM GAGVIVDNPA QKKQLSCQAA HNMLVASALS VKACHEISPA AKIGSMVAAM 

       250        260        270        280        290        300 
TAYPYSCKPE DTWEKTRMER ENYYLTDVQA RGSYPPFVLK LLEKDGVKLD ITADDKKLFA 

       310        320        330        340        350        360 
ENIVDFVSFS YYSSSAVTTD PAIAGDKGTG NIFGGIKNPH LKSSDWGWQI DPLGLRIALN 

       370        380        390        400        410        420 
FLYDRYQKPL FIVENGLGAV DKVEPDGSVN DDYRIEYLRE HVKAMKAAIE EDAVELWGYT 

       430        440        450        460        470 
TWGCIDIVSA STGEMSKRYG FIYVDQDNDG KGTLRRSKKK SFGWYKKVIE SNGEVL 

« Hide

References

[1]"Complete sequence of Treponema primitia strain ZAS-2."
Tetu S.G., Matson E., Ren Q., Seshadri R., Elbourne L., Hassan K.A., Durkin A., Radune D., Mohamoud Y., Shay R., Jin S., Zhang X., Lucey K., Ballor N.R., Ottesen E., Rosenthal R., Allen A., Leadbetter J.R., Paulsen I.T.
Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-887 / DSM 12427 / ZAS-2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001843 Genomic DNA. Translation: AEF84550.1.
RefSeqYP_004530171.1. NC_015578.1.

3D structure databases

ProteinModelPortalF5YNN0.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEF84550; AEF84550; TREPR_2952.
GeneID10681727.
KEGGtpi:TREPR_2952.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01223.
OMAFDECAKH.

Enzyme and pathway databases

BioCycTPRI545694:GH5L-1151-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10353. PTHR10353. 1 hit.
PfamPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSPR00131. GLHYDRLASE1.
SUPFAMSSF51445. SSF51445. 1 hit.
PROSITEPS00572. GLYCOSYL_HYDROL_F1_1. 1 hit.
PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF5YNN0_TREPZ
AccessionPrimary (citable) accession number: F5YNN0
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: May 14, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)