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Protein
Submitted name:

Candidate bifunctional putA protein : proline dehydrogenase, delta-1-pyrroline-5-carboxylate dehydrogenase

Gene

putA

Organism
Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Enzyme and pathway databases

BioCyciRTAT365046:GHCU-457-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Candidate bifunctional putA protein : proline dehydrogenase, delta-1-pyrroline-5-carboxylate dehydrogenaseImported
Gene namesi
Name:putAImported
Ordered Locus Names:Rta_04440Imported
OrganismiRamlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310)Imported
Taxonomic identifieri365046 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeRamlibacter
ProteomesiUP000008385 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi365046.Rta_04440.

Family & Domainsi

Sequence similaritiesi

Belongs to the aldehyde dehydrogenase family.UniRule annotation

Phylogenomic databases

KOiK13821.
OMAiHNAHTVA.

Family and domain databases

Gene3Di1.10.2060.10. 1 hit.
3.20.20.220. 1 hit.
3.40.309.10. 1 hit.
3.40.605.10. 1 hit.
InterProiIPR016161. Ald_DH/histidinol_DH.
IPR016163. Ald_DH_C.
IPR016160. Ald_DH_CS_CYS.
IPR016162. Ald_DH_N.
IPR015590. Aldehyde_DH_dom.
IPR005933. Delta1-pyrroline-5-COlate_DH-3.
IPR029041. FAD-linked_oxidoreductase-like.
IPR024089. PRODH_PutA_dom_I/II.
IPR024082. PRODH_PutA_dom_II.
IPR002872. Proline_DH_dom.
[Graphical view]
PfamiPF00171. Aldedh. 1 hit.
PF01619. Pro_dh. 1 hit.
PF14850. Pro_dh-DNA_bdg. 1 hit.
[Graphical view]
SUPFAMiSSF51730. SSF51730. 1 hit.
SSF53720. SSF53720. 1 hit.
SSF81935. SSF81935. 1 hit.
TIGRFAMsiTIGR01238. D1pyr5carbox3. 1 hit.
PROSITEiPS00070. ALDEHYDE_DEHYDR_CYS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F5Y611-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDTPAADRLP SPYRPEAAVL ADRLRRLEGA LDWAAAAAAA APWVQAVRRH
60 70 80 90 100
PPPFWAMESL LKEYPISSAE GLALMRLAEA LLRVPDAETA VALTADQLGR
110 120 130 140 150
ADFSGAADGA LARLSNAAIA LSKKLLPEQA DAPDGGGLLA RLGARTVVAA
160 170 180 190 200
TLRAVQLLGR QFVLGQDIGA ALDEADAARR AQPALLFSYD MLGEGARTAH
210 220 230 240 250
DAERYLASYR AAIAAIAARG DAARAPAESD GISIKLSALH PRYEEAQRER
260 270 280 290 300
VLRELVPRVW QLCEQAARSN LNLTIDAEEV DRLELSLAVF EALAESVAQR
310 320 330 340 350
HPRWSGFGLA LQSYQTRALE LIEHVADLAR RLGLRFMCRL VKGAYWDAEI
360 370 380 390 400
KRAQELGLPH YPVFTHKQHT DVSYLACARA LLQAADAIYP QFATHNAGTI
410 420 430 440 450
AAIRQMAERE GAAFELQRLH GMGEGVYREI LSRYTPSGQA GLAPTQPPPS
460 470 480 490 500
GGGFEPRVRV YAPVGKHRDL LAYLVRRLLE NGANSSFVHQ LADESVGLDQ
510 520 530 540 550
LLASPLAQAR ASLARLAQQP ALPLPAGLYG PGRRNSAGLD LAVAAMRAPL
560 570 580 590 600
LAAHAQLRVP PVAQAQAGEA PAAVARAAAA FPAWDARPVA ERAQALRRAA
610 620 630 640 650
DAMEARMAPL CALLVAEGRK TWGDAVAEVR EAVDFLRYYA GEAERVMQPA
660 670 680 690 700
LLPGPTGERN ELRLAGRGPW VCISPWNFPL AIFTGQVAAA LAAGNTVLAK
710 720 730 740 750
PAEQTPAVAR EAVRLLHEAG VPPDALQLLH GPGETVGAAL VAAPGVAGVV
760 770 780 790 800
FTGSTQVARL IQRALAAKDG AIVPLIAETG GINAMLVDST ALPEQVADAV
810 820 830 840 850
VQSAFRSAGQ RCSALRLLCV HEGIADAVIE MVAGAARELT VGDPALLSTD
860 870 880 890 900
VGPVIDAQAF AGLQGELQRL RQTARAVLAP AEAPAAPPHC IAPQAFEVER
910 920 930 940 950
VTDVQREIFG PVLHIARWSG DPQAVVEQVN ALGYGLTLGI QTRIDSRAQA
960 970 980 990 1000
LAARARVGNV YVNRNMIGAV VGVQPFGGEG LSGTGPKAGG PHYLPRFCAE
1010
RTLTVNTAAA GGNVALLAG
Length:1,019
Mass (Da):107,556
Last modified:July 27, 2011 - v1
Checksum:i7F8D30BDE50E5C65
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000245 Genomic DNA. Translation: AEG91515.1.
RefSeqiWP_013899748.1. NC_015677.1.

Genome annotation databases

EnsemblBacteriaiAEG91515; AEG91515; Rta_04440.
KEGGirta:Rta_04440.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000245 Genomic DNA. Translation: AEG91515.1.
RefSeqiWP_013899748.1. NC_015677.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi365046.Rta_04440.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEG91515; AEG91515; Rta_04440.
KEGGirta:Rta_04440.

Phylogenomic databases

KOiK13821.
OMAiHNAHTVA.

Enzyme and pathway databases

BioCyciRTAT365046:GHCU-457-MONOMER.

Family and domain databases

Gene3Di1.10.2060.10. 1 hit.
3.20.20.220. 1 hit.
3.40.309.10. 1 hit.
3.40.605.10. 1 hit.
InterProiIPR016161. Ald_DH/histidinol_DH.
IPR016163. Ald_DH_C.
IPR016160. Ald_DH_CS_CYS.
IPR016162. Ald_DH_N.
IPR015590. Aldehyde_DH_dom.
IPR005933. Delta1-pyrroline-5-COlate_DH-3.
IPR029041. FAD-linked_oxidoreductase-like.
IPR024089. PRODH_PutA_dom_I/II.
IPR024082. PRODH_PutA_dom_II.
IPR002872. Proline_DH_dom.
[Graphical view]
PfamiPF00171. Aldedh. 1 hit.
PF01619. Pro_dh. 1 hit.
PF14850. Pro_dh-DNA_bdg. 1 hit.
[Graphical view]
SUPFAMiSSF51730. SSF51730. 1 hit.
SSF53720. SSF53720. 1 hit.
SSF81935. SSF81935. 1 hit.
TIGRFAMsiTIGR01238. D1pyr5carbox3. 1 hit.
PROSITEiPS00070. ALDEHYDE_DEHYDR_CYS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome of the cyst-dividing bacterium Ramlibacter tataouinensis."
    Barakat M., Ortet P., De Luca G., Jourlin-Castelli C., Ansaldi M., Py B., Fichant G., Coutinho P., Voulhoux R., Bastien O., Roy S., Marechal E., Henrissat B., Quentin Y., Noirot P., Filloux A., Mejean V., DuBow M., Barras F., Heulin T.
    Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310Imported.

Entry informationi

Entry nameiF5Y611_RAMTT
AccessioniPrimary (citable) accession number: F5Y611
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: July 22, 2015
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.