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F5Y5W4 (F5Y5W4_RAMTT) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 9. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
(S)-2-haloacid dehalogenase-like protein EMBL AEG91468.1
Gene names
Ordered Locus Names:Rta_03970
OrganismRamlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) [Complete proteome] [HAMAP] EMBL AEG91468.1
Taxonomic identifier365046 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Comamonadaceae › Ramlibacter ›

Protein attributes

Sequence length239 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionhydrolase activity, acting on acid halide bonds, in C-halide compounds

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F5Y5W4 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: 985580A5F00F5897

FASTA23925,502
        10         20         30         40         50         60 
MDLNTRPTVL LFDVNETLLD VGAVKRQVGD LLQEPGAGTL WFTTMLHYSL VLTVSGQYAG 

        70         80         90        100        110        120 
FPEIGAAALR MLARNADLGL SQQDALAVMA GMRTAAAHPE VIPALERLQR AGFRMASLTN 

       130        140        150        160        170        180 
STQAGAEAQL AHAGLDRFFE RQLSVQGTGK FKPHRDVYLW AADEMGVQPS ECMLVAAHGW 

       190        200        210        220        230 
DVAGAAWAGM RTAFVAREGQ QKFPLAPEPA LDVPDLAALA TRLTATQAPS PQARPGTAP

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References

[1]"Genome of the cyst-dividing bacterium Ramlibacter tataouinensis."
Barakat M., Ortet P., De Luca G., Jourlin-Castelli C., Ansaldi M., Py B., Fichant G., Coutinho P., Voulhoux R., Bastien O., Roy S., Marechal E., Henrissat B., Quentin Y., Noirot P., Filloux A., Mejean V., DuBow M., Barras F., Heulin T.
Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000245 Genomic DNA. Translation: AEG91468.1.
RefSeqYP_004617487.1. NC_015677.1.

3D structure databases

ProteinModelPortalF5Y5W4.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEG91468; AEG91468; Rta_03970.
GeneID10830961.
KEGGrta:Rta_03970.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01560.

Enzyme and pathway databases

BioCycRTAT365046:GHCU-410-MONOMER.

Family and domain databases

Gene3D1.10.150.240. 1 hit.
3.40.50.1000. 1 hit.
InterProIPR023214. HAD-like_dom.
IPR006388. HAD-SF_hydro_IA_v2.
IPR006328. HAD_II.
IPR005833. Haloacid_DH/epoxide_hydro.
IPR023198. PGP_dom2.
[Graphical view]
PfamPF13419. HAD_2. 1 hit.
[Graphical view]
PRINTSPR00413. HADHALOGNASE.
SUPFAMSSF56784. HAD-like_dom. 1 hit.
TIGRFAMsTIGR01493. HAD-SF-IA-v2. 1 hit.
TIGR01428. HAD_type_II. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF5Y5W4_RAMTT
AccessionPrimary (citable) accession number: F5Y5W4
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: April 3, 2013
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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