F5Y582 (F5Y582_RAMTT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
30S ribosomal protein S7 HAMAP-Rule MF_00480

Gene names

Name:	rpsG HAMAP-Rule MF_00480
Ordered Locus Names:	Rta_03220

Organism

Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) [Complete proteome] [HAMAP] EMBL AEG91392.1

Taxonomic identifier

365046 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Comamonadaceae › Ramlibacter › Ramlibacter tataouinensis

Protein attributes

Sequence length	157 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA By similarity. HAMAP-Rule MF_00480
Subunit structure	Part of the 30S ribosomal subunit. Contacts proteins S9 and S11 By similarity. HAMAP-Rule MF_00480
Sequence similarities	Belongs to the ribosomal protein S7P family. HAMAP-Rule MF_00480 RuleBase RU003619

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding HAMAP-Rule MF_00480 RuleBase RU003620 tRNA-binding HAMAP-Rule MF_00480
Molecular function	Ribonucleoprotein Ribosomal protein HAMAP-Rule MF_00480 RuleBase RU003619 EMBL AEG91392.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	small ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular_function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro tRNA binding Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F5Y582 [UniParc]. Last modified July 27, 2011. Version 1. Checksum: F6DF8758777E4349	FASTA	157	17,932
	10 20 30 40 50 60 MPRRREVPKR EILPDPKYGN VELAKFMNVI MQGGKKAIAE RIVYGALEQI EKKNPGRDPV 70 80 90 100 110 120 EAFTLAINNV KPMVEVKSRR VGGANYQVPV EVRPVRRLAL SMRWLKEAAK KRGEKSMAMR 130 140 150 LANELMEATE GRGGAMKKRD EVHRMAEANK AFSHFRF

References

[1]

"Genome of the cyst-dividing bacterium Ramlibacter tataouinensis." Barakat M., Ortet P., De Luca G., Jourlin-Castelli C., Ansaldi M., Py B., Fichant G., Coutinho P., Voulhoux R., Bastien O., Roy S., Marechal E., Henrissat B., Quentin Y., Noirot P., Filloux A., Mejean V., DuBow M., Barras F., Heulin T. Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000245 Genomic DNA. Translation: AEG91392.1.
RefSeq	YP_004617411.1. NC_015677.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEG91392; AEG91392; Rta_03220.
GeneID	10830885.
KEGG	rta:Rta_03220.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K02992.
Enzyme and pathway databases
BioCyc	RTAT365046:GHCU-334-MONOMER.
Family and domain databases
Gene3D	1.10.455.10. 1 hit.
HAMAP	MF_00480_B. Ribosomal_S7_B.
InterPro	IPR000235. Ribosomal_S5/S7. IPR005717. Ribosomal_S7_bac/org-type. IPR020606. Ribosomal_S7_CS. IPR023798. Ribosomal_S7_dom. [Graphical view]
PANTHER	PTHR11205. PTHR11205. 1 hit. PTHR11205:SF13. PTHR11205:SF13. 1 hit.
Pfam	PF00177. Ribosomal_S7. 1 hit. [Graphical view]
PIRSF	PIRSF002122. RPS7p_RPS7a_RPS5e_RPS7o. 1 hit.
SUPFAM	SSF47973. Ribosomal_S7. 1 hit.
TIGRFAMs	TIGR01029. rpsG_bact. 1 hit.
PROSITE	PS00052. RIBOSOMAL_S7. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F5Y582_RAMTT

Accession

Primary (citable) accession number: F5Y582

Entry history

Integrated into UniProtKB/TrEMBL:	July 27, 2011
Last sequence update:	July 27, 2011
Last modified:	April 3, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)