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F5XWN9

- F5XWN9_RAMTT

UniProt

F5XWN9 - F5XWN9_RAMTT

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Protein
Glycerol-3-phosphate dehydrogenase [NAD(P)+]
Gene
gpsA, Rta_30730
Organism
Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310)
Status
Unreviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

sn-glycerol 3-phosphate + NAD(P)+ = glycerone phosphate + NAD(P)H.UniRule annotationSAAS annotations

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei101 – 1011NAD; via amide nitrogen By similarityUniRule annotation
Binding sitei101 – 1011Substrate By similarityUniRule annotation
Binding sitei138 – 1381NAD; via amide nitrogen By similarityUniRule annotation
Active sitei189 – 1891Proton acceptor By similarityUniRule annotation
Binding sitei253 – 2531NAD By similarityUniRule annotation
Binding sitei279 – 2791NAD By similarityUniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi3 – 86NAD By similarityUniRule annotation

GO - Molecular functioni

  1. NAD binding Source: InterPro
  2. glycerol-3-phosphate dehydrogenase [NAD(P)+] activity Source: UniProtKB-HAMAP
  3. glycerol-3-phosphate dehydrogenase [NAD+] activity Source: UniProtKB-EC
  4. glycerol-3-phosphate dehydrogenase [NADP+] activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
  2. glycerol-3-phosphate biosynthetic process Source: UniProtKB-HAMAP
  3. glycerol-3-phosphate catabolic process Source: InterPro
  4. glycerophospholipid metabolic process Source: UniProtKB-UniPathway
  5. phospholipid biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationSAAS annotations

Keywords - Biological processi

Lipid biosynthesis, Lipid metabolism, Phospholipid biosynthesisUniRule annotationSAAS annotations, Phospholipid metabolism

Keywords - Ligandi

NADUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciRTAT365046:GHCU-3156-MONOMER.
UniPathwayiUPA00940.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycerol-3-phosphate dehydrogenase [NAD(P)+]UniRule annotation (EC:1.1.1.94UniRule annotation)
Alternative name(s):
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
Gene namesi
Name:gpsAUniRule annotationImported
Ordered Locus Names:Rta_30730Imported
OrganismiRamlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310)Imported
Taxonomic identifieri365046 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeRamlibacter
ProteomesiUP000008385: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotationSAAS annotations

GO - Cellular componenti

  1. glycerol-3-phosphate dehydrogenase complex Source: InterPro
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotations

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni253 – 2542Substrate binding By similarityUniRule annotation

Sequence similaritiesi

Phylogenomic databases

KOiK00057.
OMAiMPISTAV.

Family and domain databases

Gene3Di1.10.1040.10. 1 hit.
3.40.50.720. 1 hit.
HAMAPiMF_00394. NAD_Glyc3P_dehydrog.
InterProiIPR008927. 6-PGluconate_DH_C-like.
IPR013328. DH_multihelical.
IPR006168. G3P_DH_NAD-dep.
IPR006109. G3P_DH_NAD-dep_C.
IPR011128. G3P_DH_NAD-dep_N.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PANTHERiPTHR11728. PTHR11728. 1 hit.
PfamiPF07479. NAD_Gly3P_dh_C. 1 hit.
PF01210. NAD_Gly3P_dh_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000114. Glycerol-3-P_dh. 1 hit.
PRINTSiPR00077. GPDHDRGNASE.
SUPFAMiSSF48179. SSF48179. 1 hit.
PROSITEiPS00957. NAD_G3PDH. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F5XWN9-1 [UniParc]FASTAAdd to Basket

« Hide

MLGAGAWGTA LAVSAAPRHA LTLWLRDAAQ AQALRRDGEN RRYLPGVALP    50
PGLQVRDEAP DRLLALAQAH DLVVVATPMA GLRGMLQALR RCPAPVTWLC 100
KGFEAADSGQ PQGLLGHEIQ AAVAPGLAAG ALSGPSFAQE VARGQPTALV 150
AASAHAAVRD ALVAAFHGPA LRVYANDDLA GVEVGGAVKN VLAIATGLCD 200
GLQLGLNARA ALVTRGLAEM TRLGVALGAR PDTFMGLSGL GDLVLTATGD 250
LSRNRKVGLL MAQGRTLQQA VDSLGHVAEG VYCARTVVER AGRLGVDMPI 300
ARAVVALLDG QLQPGQAVTT LMGREPAAEQ G 331
Length:331
Mass (Da):33,893
Last modified:July 27, 2011 - v1
Checksum:i5BB30F2CF6299A87
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000245 Genomic DNA. Translation: AEG94183.1.
RefSeqiYP_004620202.1. NC_015677.1.

Genome annotation databases

EnsemblBacteriaiAEG94183; AEG94183; Rta_30730.
GeneIDi10833707.
KEGGirta:Rta_30730.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000245 Genomic DNA. Translation: AEG94183.1 .
RefSeqi YP_004620202.1. NC_015677.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEG94183 ; AEG94183 ; Rta_30730 .
GeneIDi 10833707.
KEGGi rta:Rta_30730.

Phylogenomic databases

KOi K00057.
OMAi MPISTAV.

Enzyme and pathway databases

UniPathwayi UPA00940 .
BioCyci RTAT365046:GHCU-3156-MONOMER.

Family and domain databases

Gene3Di 1.10.1040.10. 1 hit.
3.40.50.720. 1 hit.
HAMAPi MF_00394. NAD_Glyc3P_dehydrog.
InterProi IPR008927. 6-PGluconate_DH_C-like.
IPR013328. DH_multihelical.
IPR006168. G3P_DH_NAD-dep.
IPR006109. G3P_DH_NAD-dep_C.
IPR011128. G3P_DH_NAD-dep_N.
IPR016040. NAD(P)-bd_dom.
[Graphical view ]
PANTHERi PTHR11728. PTHR11728. 1 hit.
Pfami PF07479. NAD_Gly3P_dh_C. 1 hit.
PF01210. NAD_Gly3P_dh_N. 1 hit.
[Graphical view ]
PIRSFi PIRSF000114. Glycerol-3-P_dh. 1 hit.
PRINTSi PR00077. GPDHDRGNASE.
SUPFAMi SSF48179. SSF48179. 1 hit.
PROSITEi PS00957. NAD_G3PDH. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome of the cyst-dividing bacterium Ramlibacter tataouinensis."
    Barakat M., Ortet P., De Luca G., Jourlin-Castelli C., Ansaldi M., Py B., Fichant G., Coutinho P., Voulhoux R., Bastien O., Roy S., Marechal E., Henrissat B., Quentin Y., Noirot P., Filloux A., Mejean V., DuBow M., Barras F., Heulin T.
    Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310.

Entry informationi

Entry nameiF5XWN9_RAMTT
AccessioniPrimary (citable) accession number: F5XWN9
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: June 11, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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