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F5XPH8 (F5XPH8_MICPN) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length740 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Binds 1 magnesium or manganese ion per subunit By similarity. PIRSR PIRSR009407-3

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region134 – 1418Substrate binding By similarity PIRSR PIRSR009407-2

Sites

Metal binding3501Magnesium or manganese By similarity PIRSR PIRSR009407-3
Metal binding5481Magnesium or manganese By similarity PIRSR PIRSR009407-3
Metal binding5521Magnesium or manganese By similarity PIRSR PIRSR009407-3
Binding site1471Substrate By similarity PIRSR PIRSR009407-2
Binding site5471Substrate By similarity PIRSR PIRSR009407-2
Site2571Critical for catalysis By similarity
Site4201Critical for catalysis By similarity

Sequences

Sequence LengthMass (Da)Tools
F5XPH8 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: FF530C866D0676D7

FASTA74079,570
        10         20         30         40         50         60 
MVQSSARIVY TRTDEAPLLA TYSLLPIIAA YAAKAGVDIE SRDISLAARI LAQFPERLGA 

        70         80         90        100        110        120 
DQQVPDALAE LGALAKTPEA NIIKLPNISA SIPQLKAAIR ELQEKGFDLP DYPDDPKSDE 

       130        140        150        160        170        180 
DRSIRARYDK VKGSAVNPVL REGNSDRRAP LSVKNYARKH PHRMGAWSGD SKTNVAHMTA 

       190        200        210        220        230        240 
DDFRSNEKSV VIPADTSLRI ALVEEAGAET VLRESVPVLA GEVVDATVLR VAALRAFLTE 

       250        260        270        280        290        300 
QIARAKAENV LLSVHLKATM MKVSDPIIFG HAVRAFFPEV FETYGDALAT AGLSPNDGLG 

       310        320        330        340        350        360 
AILAGLDALP EGPEIKAAID RGFAEGPALA MVDSDRGISN LHVPSDVIVD ASMPAMIRTS 

       370        380        390        400        410        420 
GHMWGPDGAE ADTLAVLPDS SYAPIYQVVI DDCRANGAFD PATMGSVPNV GLMAQAAEEY 

       430        440        450        460        470        480 
GSHDKTFEIP AEGVVKVTDS EGNVVLEHRV SQGDIWRMCQ AKDVPIRDWI KLAVSRARAT 

       490        500        510        520        530        540 
GSPAVFWLDE TRAHDANLIA KINETLPEYD TDGLEIKILS PADAMAYSLE RIRRGEDTIS 

       550        560        570        580        590        600 
VTGNVLRDYL TDLFPIMELG TSAKMLSVVP LINGGGLFET GAGGSAPKHV QQLLKEDYLR 

       610        620        630        640        650        660 
WDSLGEFLAL AVSLEHLAQS TGNKRAQVLA DTLDRATGTF LDENKSPARR VGSIDNRGSH 

       670        680        690        700        710        720 
FYLALYWAEE LAAQTDDAEL AAEFATLAAA LREQEQTISD ELIAVQGAPV DIGGYYRPDD 

       730        740 
DLTSAVMRPS ATFNAAIAAL 

« Hide

References

[1]"Whole genome sequence of Microlunatus phosphovorus NM-1."
Hosoyama A., Sasaki K., Harada T., Igarashi R., Kawakoshi A., Sasagawa M., Fukada J., Nakamura S., Katano Y., Hanada S., Kamagata Y., Nakamura N., Yamazaki S., Fujita N.
Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP012204 Genomic DNA. Translation: BAK34286.1.
RefSeqYP_004571689.1. NC_015635.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAK34286; BAK34286; MLP_12720.
GeneID10767775.
KEGGmph:MLP_12720.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00031.

Enzyme and pathway databases

BioCycMPHO1032480:GHBY-1284-MONOMER.

Family and domain databases

Gene3D3.40.718.10. 3 hits.
InterProIPR004436. Isocitrate_DH_NADP_mono.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PfamPF03971. IDH. 1 hit.
[Graphical view]
PIRSFPIRSF009407. IDH_monmr. 1 hit.
TIGRFAMsTIGR00178. monomer_idh. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF5XPH8_MICPN
AccessionPrimary (citable) accession number: F5XPH8
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: October 16, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)