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F5XBS1 (F5XBS1_PORGT) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:PGTDC60_1468 EMBL BAK25617.1
OrganismPorphyromonas gingivalis (strain TDC60) [Complete proteome] [HAMAP] EMBL BAK25617.1
Taxonomic identifier1030843 [NCBI]
Taxonomic lineageBacteriaBacteroidetesBacteroidiaBacteroidalesPorphyromonadaceaePorphyromonas

Protein attributes

Sequence length502 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionexo-alpha-sialidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F5XBS1 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: 0822BB269727BB4E

FASTA50255,776
        10         20         30         40         50         60 
MLHLTAQEVT MWGDSHGVAP NQMYRTLVKV ALSESLPPDA KQIRIGFSLP KETEEKVTAL 

        70         80         90        100        110        120 
YLLVSDSLAV RDLPDYKGRV SYDSFPISKE DRTTALSADS VAGRRFFYLA ADIGPVASFS 

       130        140        150        160        170        180 
RSDTLTARVE ELAVDGRPLP LKELSPASRR LYREYEALFV PGDGGSRNYR IPAILKTANG 

       190        200        210        220        230        240 
TLIAMADRRK YNQTDLPEDI DIVMRRSTDG GKSWSDPRII VQGEGRNHGF GDVALVQTQA 

       250        260        270        280        290        300 
GKLLMIFVGG VGLWQSTPDR PQRTYISGSR DEGLTWSPPR DITHFIFGKD CADPGRSRWL 

       310        320        330        340        350        360 
ASFCASGQGL VLPSGRIMFV AAIRESGQEY VLNNYVLYSD DEGDTWQLSD CAYRRGDEAK 

       370        380        390        400        410        420 
LSLMPDGRVL MSIRNQGRQE SRQRFFALSS DDGLTWERAK QFEGIHDPGC NGAMLQVKRN 

       430        440        450        460        470        480 
GRDQVLHSLP LGPDGRRDGA VYLFDHTSGR WSAPVVVNSG SSAYSDMTLL ADGTIGYFVE 

       490        500 
EDDEISLVFI RFVLDDLFDA RQ 

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References

[1]"Complete genome sequence of the bacterium Porphyromonas gingivalis TDC60, which causes periodontal disease."
Watanabe T., Maruyama F., Nozawa T., Aoki A., Okano S., Shibata Y., Oshima K., Kurokawa K., Hattori M., Nakagawa I., Abiko Y.
J. Bacteriol. 193:4259-4260(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: TDC60 EMBL BAK25617.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP012203 Genomic DNA. Translation: BAK25617.1.
RefSeqYP_004510183.1. NC_015571.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAK25617; BAK25617; PGTDC60_1468.
GeneID10721606.
KEGGpgt:PGTDC60_1468.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01186.

Enzyme and pathway databases

BioCycPGIN1030843:GJTB-1507-MONOMER.

Family and domain databases

Gene3D2.120.10.10. 1 hit.
InterProIPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERPTHR10628. PTHR10628. 1 hit.
SUPFAMSSF50939. SSF50939. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF5XBS1_PORGT
AccessionPrimary (citable) accession number: F5XBS1
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: May 14, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)