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F5X6E2 (F5X6E2_STRPX) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.2.1.1 EMBL BAK29982.1
Gene names
Name:amyS EMBL BAK29982.1
Ordered Locus Names:SGPB_0905 EMBL BAK29982.1
OrganismStreptococcus pasteurianus (strain ATCC 43144 / JCM 5346 / CDC 1723-81) [Complete proteome] [HAMAP]
Taxonomic identifier981540 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus

Protein attributes

Sequence length484 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionGlycosidase EMBL BAK29982.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionalpha-amylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

calcium ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F5X6E2 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: 4596B7E7C1A6962F

FASTA48455,617
        10         20         30         40         50         60 
MTNETLMQYF EWYLPNDGKH WQRLAADAPE LAQKGISKIW LPPAFKATHA GDVGYGVYDL 

        70         80         90        100        110        120 
FDLGEFDQKG TIRTKYGTKA DYLAAIASLK ENGIEPLADV ILNHKAAADH TETFTVVEVS 

       130        140        150        160        170        180 
PEDRTELLSE HFEIEGWTNF TFAGRHKTYN DFEWHWYHFT GTDYDVKTGK TGIFQIQGDN 

       190        200        210        220        230        240 
KGWANQGLVD GENGNYDYLM YADLDFKHPE VIKNIYDWAD WFVQTTGIAG FRLDAIKHID 

       250        260        270        280        290        300 
SFFMGNFIRD MKLKYGDDFY VFGEFWNGDE QSNNDYLENT DYRFDLVDVR LHQNLFEASQ 

       310        320        330        340        350        360 
EMEDYDLRTI FDQTLVKNHP DSAVTFVDNH DTQRGQALES TIAEWFKPAA YALILLRQTG 

       370        380        390        400        410        420 
LPCIFYGDYY GISDEFAQEN FQNEIDQLLQ LRQTAVYGQE EDYFDDPNCI AWTCLGDDEH 

       430        440        450        460        470        480 
PTALAILISN ANATSKRLFV GEKWANHIFT DALENNQTEV TIDAQGYGVF PVNEKSVSAW 


GPNH 

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References

[1]"Sequencing and comparative genome analysis of two pathogenic Streptococcus gallolyticus subspecies: genome plasticity, adaptation and virulence."
Lin I.-H., Liu T.-T., Teng Y.-T., Wu H.-L., Liu Y.-M., Wu K.-M., Chang C.-H., Hsu M.-T.
PLoS ONE 6:E20519-E20519(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 43144 / JCM 5346 / CDC 1723-81.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP012054 Genomic DNA. Translation: BAK29982.1.
RefSeqYP_004559068.1. NC_015600.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAK29982; BAK29982; SGPB_0905.
GeneID10752577.
KEGGstb:SGPB_0905.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.
OMAFNGTDYD.

Enzyme and pathway databases

BioCycSPAS981540:GJYA-972-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF5X6E2_STRPX
AccessionPrimary (citable) accession number: F5X6E2
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: May 14, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)