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F5X5K1 (F5X5K1_STRPX) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Isocitrate dehydrogenase [NADP] RuleBase RU004446

EC=1.1.1.42 RuleBase RU004446
Gene names
Name:icd EMBL BAK29691.1
Ordered Locus Names:SGPB_0584 EMBL BAK29691.1
OrganismStreptococcus pasteurianus (strain ATCC 43144 / JCM 5346 / CDC 1723-81) [Complete proteome] [HAMAP]
Taxonomic identifier981540 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus

Protein attributes

Sequence length391 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequences

Sequence LengthMass (Da)Tools
F5X5K1 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: 8D00AB2684BB62BA

FASTA39142,591
        10         20         30         40         50         60 
MADKIILENG HLTVSNNPII PFIEGDGVGR DIWKNARAVF DAAIDKAYQG QKKVEWLELL 

        70         80         90        100        110        120 
AGKKAHEATG EWLPEATLET IKEDLVAIKG PLETPVGGGI RSLNVALRQE LDLYACVRPV 

       130        140        150        160        170        180 
RYFKGIESPL KEPEKTSITI FRENTEDIYA GIEWNAGTEE VKKVIDFLQN EMSVSKIRFP 

       190        200        210        220        230        240 
ETSSIGIKPI SQEGSERLIR SAIEYALANN LTKVTLVHKG NIQKFTEGGF RSWGYDLAKR 

       250        260        270        280        290        300 
EYADELASGK LVINDIIADN FLQQILLNPE KFDVVALTNL NGDYASDALA AQVGGIGISP 

       310        320        330        340        350        360 
GANINYLTGH AIFEATHGTA PDIAGKDIAN PCSVLLSGCM LFDYIGWTEV ASLITAAIEK 

       370        380        390 
TFAQGQFTAD LAQEKVACST SGFAAKLIEN L 

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References

[1]"Sequencing and comparative genome analysis of two pathogenic Streptococcus gallolyticus subspecies: genome plasticity, adaptation and virulence."
Lin I.-H., Liu T.-T., Teng Y.-T., Wu H.-L., Liu Y.-M., Wu K.-M., Chang C.-H., Hsu M.-T.
PLoS ONE 6:E20519-E20519(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 43144 / JCM 5346 / CDC 1723-81.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP012054 Genomic DNA. Translation: BAK29691.1.
RefSeqYP_004558777.1. NC_015600.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAK29691; BAK29691; SGPB_0584.
GeneID10753366.
KEGGstb:SGPB_0584.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00031.
OMAAMMLEYL.

Enzyme and pathway databases

BioCycSPAS981540:GJYA-647-MONOMER.

Family and domain databases

Gene3D3.40.718.10. 1 hit.
InterProIPR019818. IsoCit/isopropylmalate_DH_CS.
IPR001804. Isocitrate/isopropylmalate_DH.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PANTHERPTHR11835. PTHR11835. 1 hit.
PfamPF00180. Iso_dh. 1 hit.
[Graphical view]
PROSITEPS00470. IDH_IMDH. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF5X5K1_STRPX
AccessionPrimary (citable) accession number: F5X5K1
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: October 16, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)