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Protein

Isocitrate dehydrogenase [NADP]

Gene

icd

Organism
Streptococcus pasteurianus (strain ATCC 43144 / JCM 5346 / CDC 1723-81)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Enzyme and pathway databases

BioCyciSPAS981540:GJYA-647-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Isocitrate dehydrogenase [NADP]UniRule annotation (EC:1.1.1.42UniRule annotation)
Gene namesi
Name:icdImported
Ordered Locus Names:SGPB_0584Imported
OrganismiStreptococcus pasteurianus (strain ATCC 43144 / JCM 5346 / CDC 1723-81)Imported
Taxonomic identifieri981540 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus
ProteomesiUP000007946 Componenti: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the isocitrate and isopropylmalate dehydrogenases family.UniRule annotation

Phylogenomic databases

KOiK00031.
OMAiAMMLEYL.

Family and domain databases

Gene3Di3.40.718.10. 1 hit.
InterProiIPR019818. IsoCit/isopropylmalate_DH_CS.
IPR001804. Isocitrate/isopropylmalate_DH.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PANTHERiPTHR11835. PTHR11835. 1 hit.
PfamiPF00180. Iso_dh. 1 hit.
[Graphical view]
PROSITEiPS00470. IDH_IMDH. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F5X5K1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADKIILENG HLTVSNNPII PFIEGDGVGR DIWKNARAVF DAAIDKAYQG
60 70 80 90 100
QKKVEWLELL AGKKAHEATG EWLPEATLET IKEDLVAIKG PLETPVGGGI
110 120 130 140 150
RSLNVALRQE LDLYACVRPV RYFKGIESPL KEPEKTSITI FRENTEDIYA
160 170 180 190 200
GIEWNAGTEE VKKVIDFLQN EMSVSKIRFP ETSSIGIKPI SQEGSERLIR
210 220 230 240 250
SAIEYALANN LTKVTLVHKG NIQKFTEGGF RSWGYDLAKR EYADELASGK
260 270 280 290 300
LVINDIIADN FLQQILLNPE KFDVVALTNL NGDYASDALA AQVGGIGISP
310 320 330 340 350
GANINYLTGH AIFEATHGTA PDIAGKDIAN PCSVLLSGCM LFDYIGWTEV
360 370 380 390
ASLITAAIEK TFAQGQFTAD LAQEKVACST SGFAAKLIEN L
Length:391
Mass (Da):42,591
Last modified:July 27, 2011 - v1
Checksum:i8D00AB2684BB62BA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP012054 Genomic DNA. Translation: BAK29691.1.
RefSeqiWP_013851634.1. NC_015600.1.
YP_004558777.1. NC_015600.1.

Genome annotation databases

EnsemblBacteriaiBAK29691; BAK29691; SGPB_0584.
KEGGistb:SGPB_0584.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP012054 Genomic DNA. Translation: BAK29691.1.
RefSeqiWP_013851634.1. NC_015600.1.
YP_004558777.1. NC_015600.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAK29691; BAK29691; SGPB_0584.
KEGGistb:SGPB_0584.

Phylogenomic databases

KOiK00031.
OMAiAMMLEYL.

Enzyme and pathway databases

BioCyciSPAS981540:GJYA-647-MONOMER.

Family and domain databases

Gene3Di3.40.718.10. 1 hit.
InterProiIPR019818. IsoCit/isopropylmalate_DH_CS.
IPR001804. Isocitrate/isopropylmalate_DH.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PANTHERiPTHR11835. PTHR11835. 1 hit.
PfamiPF00180. Iso_dh. 1 hit.
[Graphical view]
PROSITEiPS00470. IDH_IMDH. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Sequencing and comparative genome analysis of two pathogenic Streptococcus gallolyticus subspecies: genome plasticity, adaptation and virulence."
    Lin I.-H., Liu T.-T., Teng Y.-T., Wu H.-L., Liu Y.-M., Wu K.-M., Chang C.-H., Hsu M.-T.
    PLoS ONE 6:E20519-E20519(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43144 / JCM 5346 / CDC 1723-81Imported.

Entry informationi

Entry nameiF5X5K1_STRPX
AccessioniPrimary (citable) accession number: F5X5K1
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: April 29, 2015
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.