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Protein
Submitted name:

Extracellular alpha amylase

Gene

amyS

Organism
Streptococcus gallolyticus (strain ATCC 43143 / F-1867)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei234 – 2341NucleophileUniRule annotation
Active sitei264 – 2641Proton donorUniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciSGAL981539:GLL2-1100-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Extracellular alpha amylaseImported (EC:3.2.1.1Imported)
Gene namesi
Name:amySImported
Ordered Locus Names:SGGB_1033Imported
OrganismiStreptococcus gallolyticus (strain ATCC 43143 / F-1867)Imported
Taxonomic identifieri981539 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus
ProteomesiUP000007945: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

F5X0U1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTNETLMQYF EWYLPNDGKH WQRLAANAPE LAQKGISKIW LPPAFKATHA
60 70 80 90 100
GDVGYGVYDL FDLGEFDQKG TIRTKYGTKA DYLVAIASLK ENGIEPLADV
110 120 130 140 150
ILNHKAAADH TETFTVVEVS PEDRTEVLSE PFEIEGWTNF TFAGRHKTYN
160 170 180 190 200
DFEWHWYHFT GTDYDVKTGK TGIFQIQGDN KGWANQDLVD DENGNYDYLM
210 220 230 240 250
YADLDFKHPE VIKNIYDWAD WFVQTTGIAG FRLDAIKHID SFFMGNFIRD
260 270 280 290 300
MKLKYGDDFY VFGEFWNGDE QSNNDYLENT DYRFDLVDVR LHQNLFEASQ
310 320 330 340 350
EMEAYDLRTI FDQTLVKNHP DSAVTFVDNH DTQRGQALES TIAEWFKPAA
360 370 380 390 400
YALILLRQTG LPCIFYGDYY GISGEFAQEN FKKEIDQLLQ LRQTAVYGQE
410 420 430 440 450
EDYFDDPNCI AWTCLGDDEH PTALAILISN ADAAPKRLFV GEKWANHIFT
460 470 480
DALENNQTEV TIDAQGYGVF PVNEKSVSAW VPNH
Length:484
Mass (Da):55,642
Last modified:July 27, 2011 - v1
Checksum:iDD4ACAB847559F4B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP012053 Genomic DNA. Translation: BAK27902.1.
RefSeqiYP_006033861.1. NC_017576.1.

Genome annotation databases

EnsemblBacteriaiBAK27902; BAK27902; SGGB_1033.
GeneIDi12630234.
KEGGisgt:SGGB_1033.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP012053 Genomic DNA. Translation: BAK27902.1.
RefSeqiYP_006033861.1. NC_017576.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAK27902; BAK27902; SGGB_1033.
GeneIDi12630234.
KEGGisgt:SGGB_1033.

Phylogenomic databases

KOiK01176.

Enzyme and pathway databases

BioCyciSGAL981539:GLL2-1100-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Sequencing and comparative genome analysis of two pathogenic Streptococcus gallolyticus subspecies: genome plasticity, adaptation and virulence."
    Lin I.-H., Liu T.-T., Teng Y.-T., Wu H.-L., Liu Y.-M., Wu K.-M., Chang C.-H., Hsu M.-T.
    PLoS ONE 6:E20519-E20519(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43143 / F-1867Imported.

Entry informationi

Entry nameiF5X0U1_STRG1
AccessioniPrimary (citable) accession number: F5X0U1
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: February 4, 2015
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.