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F5WSV3 (F5WSV3_ERYRF) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Beta-galactosidase EMBL BAK31835.1
Gene names
Ordered Locus Names:ERH_0780 EMBL BAK31835.1
OrganismErysipelothrix rhusiopathiae (strain Fujisawa) [Complete proteome] [HAMAP] EMBL BAK31835.1
Taxonomic identifier650150 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Erysipelotrichi › Erysipelotrichales › Erysipelotrichaceae › Erysipelothrix ›

Protein attributes

Sequence length2091 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
F5WSV3 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: 621244E0B596C929

FASTA2,091232,623
        10         20         30         40         50         60 
MNSSFRKAVK IMGVVVAVTC SSVFIEKTPI HAAVVEPVVT KTDSRNVDFN DDWKFKLNVS 

        70         80         90        100        110        120 
GTSSPSEIDY DETDWQALSL PHDWSIFFDF DHNSPAQNEG GLLNGGTGWY RKTFVFDKKM 

       130        140        150        160        170        180 
DKNVRLNFGG VYMDSTVFVN GKEVGNYPNG YTPFSYDITS YLNQEGPNTI AVKVVNKQPS 

       190        200        210        220        230        240 
SRWYSGSGIY RDVSLTYTDD VSIKEYGTTV LTPNLDKEVG KDVTTEVKTT VLNKSKKAEK 

       250        260        270        280        290        300 
VKVKTEVVTV DGTSMGKAET KEVEIQAGKE QTLDSTIMVS NPSLWDIDSP VTYRVKTQVL 

       310        320        330        340        350        360 
KSNRVVDETV ERFGYRYMNW TPSGGFSLNG NDVKFYGVSM HHDQGALGSV ANYDAMRRQM 

       370        380        390        400        410        420 
EILKDMGVNS VRITHNPADD KLLAIAEDLG LMIIDEAFDT WYGGKKPYDY GRFFEAKATH 

       430        440        450        460        470        480 
PEALDGQSWA EYDLKRMVAR GKNSPAVIMW SLGNEIGESN SGSAKAVQTI RNLHRWTKEV 

       490        500        510        520        530        540 
DDTRYTTMGQ DVYRWAPTGG HELISAEVDA VGINYAEDSY KAIRAKHPDW LIYGSETSSA 

       550        560        570        580        590        600 
TRSRGVYAFP DELRSHDNSA ARKYQQSDYG NDHVGWGKTA TNSWIPDRDE KGYAGQFIWT 

       610        620        630        640        650        660 
GFDYIGEPTP WHNQNQTPPK SSYFGIIDTA GFPKNDFYLY QSQWKDVETD PMVHILPHWN 

       670        680        690        700        710        720 
WEKESLLDYN MRTRDGKIPV RIFSNAAKVE LFLDDVSLGE KAFVQKTTAY GRPYQEGANA 

       730        740        750        760        770        780 
KELYLEWRLD FKPGTLKAIA KDKDGNVIAE DVIKTSKGSA AVELVPEKRV IQNGRDHLSY 

       790        800        810        820        830        840 
IHVNVVDENG VMNPNAQNNI IFTLEGNGEI VGVDNGDPAS NERYKAQHDG TWQRKAFNGK 

       850        860        870        880        890        900 
ALVIVKSDGQ EGSFKLTAKA ENLSEGKTEV FAIEKKPETP SILGFDDVSV FTETHVQPEL 

       910        920        930        940        950        960 
PKTVNAIYSD GSEKAVDVNW ETIEASKLEQ PGSFSVKGTV EGVAIPVNAT VLVRMITDLI 

       970        980        990       1000       1010       1020 
DPVLATPKGT MPSLPSTVIA YYSNGAEVNL PVTWESITDA MIAEAGVLKI SGQAHSGGQD 

      1030       1040       1050       1060       1070       1080 
YPVFAHITVL EATAVQENIA IRRPQDTYPI ATSSYMSGGD RIERINDGTI AFENRWTNWV 

      1090       1100       1110       1120       1130       1140 
NNFGDKQEEW VMLEFEKIET IHQVGIHFFT DNTTKVPASL TIETSVDGVT FTPVVNQSKN 

      1150       1160       1170       1180       1190       1200 
NNFVVTSGDV KTEIPIKFDK VDAKFVRLNM TSQMNGDKPR PMGLSELKVI GDTFKIEANS 

      1210       1220       1230       1240       1250       1260 
KAELEMIHLD TKPLENFKVD QNVYVVGVPF GKALPVLKGT AKAGSFVNVV QPTRDNNYQG 

      1270       1280       1290       1300       1310       1320 
KVRVTSEDGL NSKDYDVTYV VSDPVYDHTT LTLDRIEGKT QETIPFKTES LLEDGTAIAP 

      1330       1340       1350       1360       1370       1380 
SLLDITYEVV QGDASGIRMN AGLIYLHKEG TYTVKAHVSY GGKTYESNEV SFTVTKNEVQ 

      1390       1400       1410       1420       1430       1440 
EPIKAFKPVV IRTERSQKIE LPKTVTAQYE TLFDKDVAVT WDAFDVLRLD EYGTFEIKGR 

      1450       1460       1470       1480       1490       1500 
VEGTDIQAVA KVIVEGYVGV ESFSLVTPKD KSFKLPLKAK AYHNTGRVDE FNVVWEAFDK 

      1510       1520       1530       1540       1550       1560 
ENLKTPGTYI LKGMVETANT ETTLTIRVAA EYEKGDNIAK MWTGSELPAA IASFTNDGPG 

      1570       1580       1590       1600       1610       1620 
SNDRVSAMND AVISYTNTPA NRWTNWQAQS REKDWVGIVF ADAGTMAPRF VDNFNIGFFE 

      1630       1640       1650       1660       1670       1680 
DNGTGYPGSY VIEVLKEGIK PELPTKFGHI SSEDSVLNDP NNWVEVQNLK AKPFAYQTMN 

      1690       1700       1710       1720       1730       1740 
TLTFDGVETY AVRINMTKQA NKKGLAVTEI EVYDRIAKAH QDFTVTLKVD GKDVDAFTQD 

      1750       1760       1770       1780       1790       1800 
HNFVYEQKTN NLPSLELQAT NNANITAIEI ENGMKYVVRA EDGIKTETYT ITYDTSIRDA 

      1810       1820       1830       1840       1850       1860 
RNALVKMISK AKNVEIEGYE SLGVQAMQAS ILKAQTAVED LNTDVKTLQS LTKLLEKNID 

      1870       1880       1890       1900       1910       1920 
DLVAVGDQID KARESLQAMI DIAESIDRTL YTDESLAALD KQLSFAKVSY EDDSATTVIL 

      1930       1940       1950       1960       1970       1980 
DVVTQNLREA IFGLEYRDQT VKGPFDSITM NPKVSFEGST PITEEAFINA LNIQNPDGVA 

      1990       2000       2010       2020       2030       2040 
FDIETNFMEL VDQNTEGTYA VTVRLIRAQR AFFRMKSNPY VKEFKVDVTI QGESSKPIVT 

      2050       2060       2070       2080       2090 
EPKEESVTPE APTTPPSTLP TTGVGTRNVS ILITLGGLMY VVSLKKKRKQ K

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References

[1]"The genome of Erysipelothrix rhusiopathiae, the causative agent of swine erysipelas, reveals new insights into the evolution of firmicutes and the organism's intracellular adaptations."
Ogawa Y., Ooka T., Shi F., Ogura Y., Nakayama K., Hayashi T., Shimoji Y.
J. Bacteriol. 193:2959-2971(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Fujisawa EMBL BAK31835.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP012027 Genomic DNA. Translation: BAK31835.1.
RefSeqYP_004560876.1. NC_015601.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAK31835; BAK31835; ERH_0780.
GeneID10755767.
KEGGerh:ERH_0780.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01190.

Enzyme and pathway databases

BioCycERHU650150:GHGV-810-MONOMER.

Family and domain databases

Gene3D2.60.120.260. 3 hits.
2.60.40.320. 1 hit.
3.20.20.80. 1 hit.
InterProIPR011081. Big_4.
IPR000421. Coagulation_fac_5/8-C_type_dom.
IPR008979. Galactose-bd-like.
IPR006101. Glyco_hydro_2.
IPR013812. Glyco_hydro_2/20_Ig-like.
IPR006102. Glyco_hydro_2_Ig-like.
IPR006104. Glyco_hydro_2_N.
IPR006103. Glyco_hydro_2_TIM.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamPF07532. Big_4. 4 hits.
PF00754. F5_F8_type_C. 1 hit.
PF00703. Glyco_hydro_2. 1 hit.
PF02836. Glyco_hydro_2_C. 1 hit.
PF02837. Glyco_hydro_2_N. 1 hit.
[Graphical view]
PRINTSPR00132. GLHYDRLASE2.
SUPFAMSSF49785. Gal_bind_like. 2 hits.
SSF49303. Glyco_hydro_2Ig. 1 hit.
SSF51445. Glyco_hydro_cat. 1 hit.
PROSITEPS50022. FA58C_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF5WSV3_ERYRF
AccessionPrimary (citable) accession number: F5WSV3
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: May 29, 2013
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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