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F5HGK7

- F5HGK7_CRYNB

UniProt

F5HGK7 - F5HGK7_CRYNB

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Protein
Submitted name: Putative uncharacterized protein
Gene
CNBA5310
Organism
Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) (Filobasidiella neoformans)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Ordered Locus Names:CNBA5310Imported
OrganismiCryptococcus neoformans var. neoformans serotype D (strain B-3501A) (Filobasidiella neoformans)
Taxonomic identifieri283643 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaAgaricomycotinaTremellomycetesTremellalesTremellaceaeFilobasidiellaFilobasidiella/Cryptococcus neoformans species complex
ProteomesiUP000001435: Chromosome 1

Structurei

3D structure databases

ProteinModelPortaliF5HGK7.

Family & Domainsi

Phylogenomic databases

KOiK10747.
OrthoDBiEOG7TXKRG.

Family and domain databases

Gene3Di1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F5HGK7-1 [UniParc]FASTAAdd to Basket

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MPADSKVKRG AKPQATPITP PSKKFKQAAV TQQRPISSFF HSPVKSSIKG    50
KEVIIIEDSD SDDYPESSTQ AAIAHDGNGD VESSRNHVLQ LPEENQISSL 100
SCVKEKDGHG MASTSKVFHE RSKTTPNGTA ISSRTEGQSD RVHYFSRKSQ 150
RTITGDEPVP PSSITTCASE DSVQNIDFDR DPLAFDPSRV IATSWPKGRL 200
PYSILVSVYV QLSSTKSRLA IVRILTNFLH LLMHTSPPDL TPCLYLLSNH 250
LTPSYIHCDL GIGSSILSKS IQEISGLQAR DLKHLWQKYG DPGDVAFEAK 300
NKLRTLVQPA PLLAGEVYDK LLEIAKVKGS NSGKIKNELV RKLLIRAKGE 350
EVRFLVRSIV GNLRIGAVRL TLLTALARAT TITRLPADLK QSIIPLPRAT 400
ANDGRNDKRS VITKAPPDVA RDSAETLCLD AIRIVRKVYV RHPNYEDLVA 450
GLKEGVESLE DKVPVSVGIP LSPMLGSITR SLNEVFTRLG HLSFTAEAKL 500
DGQRGQLHIR LDGPEGKDDG GGRWVYADNG TKVWVRLFSR HLEDMTDKYP 550
DICHLALDLL SRPLATERPP FPAVSSRPFS RVIDLLHINN ITSVVMDTEI 600
VALDKDTGNF RTFQELSNRA KKDVKMEEIK VIVGVFAFDL MVLNDVSLLD 650
VPFSHRRHLL HSLLPPFAPN SNEVGHPVAR FTHVEYIDSV HLTDPEAELQ 700
AFFERVVEKK CEGLMVKLLE NGEGLAGEEA TEDSLGQEGG LEVKSEQKNG 750
SKSKRQPLPA TYEPDQRSQG WLKVKKDYLE GLGDSLDLVP IGAWWGQGRK 800
AGWWSPILLA CHNPDSGALE AVCKCMSGFS DAFYKDLSKR YPAEGMPSKC 850
SKIAPIGFVN TNGLIPDVWF EPSEVWEIKG ADITLSPVYP AASSHLGSER 900
GLSVRFPRFI RMRDDKTWED AMTSDQLADM YRRQIKEGEK TTKN 944
Length:944
Mass (Da):104,542
Last modified:June 28, 2011 - v1
Checksum:i5ADF7C7C76AE2B29
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AAEY01000003 Genomic DNA. Translation: EAL23187.1.
RefSeqiXP_777834.1. XM_772741.1.

Genome annotation databases

GeneIDi4933794.
KEGGicnb:CNBA5310.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AAEY01000003 Genomic DNA. Translation: EAL23187.1 .
RefSeqi XP_777834.1. XM_772741.1.

3D structure databases

ProteinModelPortali F5HGK7.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 4933794.
KEGGi cnb:CNBA5310.

Phylogenomic databases

KOi K10747.
OrthoDBi EOG7TXKRG.

Family and domain databases

Gene3Di 1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans."
    Loftus B.J., Fung E., Roncaglia P., Rowley D., Amedeo P., Bruno D., Vamathevan J., Miranda M., Anderson I.J., Fraser J.A., Allen J.E., Bosdet I.E., Brent M.R., Chiu R., Doering T.L., Donlin M.J., D'Souza C.A., Fox D.S.
    , Grinberg V., Fu J., Fukushima M., Haas B.J., Huang J.C., Janbon G., Jones S.J.M., Koo H.L., Krzywinski M.I., Kwon-Chung K.J., Lengeler K.B., Maiti R., Marra M.A., Marra R.E., Mathewson C.A., Mitchell T.G., Pertea M., Riggs F.R., Salzberg S.L., Schein J.E., Shvartsbeyn A., Shin H., Shumway M., Specht C.A., Suh B.B., Tenney A., Utterback T.R., Wickes B.L., Wortman J.R., Wye N.H., Kronstad J.W., Lodge J.K., Heitman J., Davis R.W., Fraser C.M., Hyman R.W.
    Science 307:1321-1324(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: B-3501A.

Entry informationi

Entry nameiF5HGK7_CRYNB
AccessioniPrimary (citable) accession number: F5HGK7
Entry historyi
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: November 13, 2013
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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