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F5HGK7

- F5HGK7_CRYNB

UniProt

F5HGK7 - F5HGK7_CRYNB

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Protein
Submitted name:

Uncharacterized protein

Gene

CNBA5310

Organism
Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) (Filobasidiella neoformans)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:CNBA5310Imported
OrganismiCryptococcus neoformans var. neoformans serotype D (strain B-3501A) (Filobasidiella neoformans)Imported
Taxonomic identifieri283643 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaAgaricomycotinaTremellomycetesTremellalesTremellaceaeFilobasidiellaFilobasidiella/Cryptococcus neoformans species complex
ProteomesiUP000001435: Chromosome 1

Structurei

3D structure databases

ProteinModelPortaliF5HGK7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK10747.
OrthoDBiEOG7TXKRG.

Family and domain databases

Gene3Di1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F5HGK7-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MPADSKVKRG AKPQATPITP PSKKFKQAAV TQQRPISSFF HSPVKSSIKG
60 70 80 90 100
KEVIIIEDSD SDDYPESSTQ AAIAHDGNGD VESSRNHVLQ LPEENQISSL
110 120 130 140 150
SCVKEKDGHG MASTSKVFHE RSKTTPNGTA ISSRTEGQSD RVHYFSRKSQ
160 170 180 190 200
RTITGDEPVP PSSITTCASE DSVQNIDFDR DPLAFDPSRV IATSWPKGRL
210 220 230 240 250
PYSILVSVYV QLSSTKSRLA IVRILTNFLH LLMHTSPPDL TPCLYLLSNH
260 270 280 290 300
LTPSYIHCDL GIGSSILSKS IQEISGLQAR DLKHLWQKYG DPGDVAFEAK
310 320 330 340 350
NKLRTLVQPA PLLAGEVYDK LLEIAKVKGS NSGKIKNELV RKLLIRAKGE
360 370 380 390 400
EVRFLVRSIV GNLRIGAVRL TLLTALARAT TITRLPADLK QSIIPLPRAT
410 420 430 440 450
ANDGRNDKRS VITKAPPDVA RDSAETLCLD AIRIVRKVYV RHPNYEDLVA
460 470 480 490 500
GLKEGVESLE DKVPVSVGIP LSPMLGSITR SLNEVFTRLG HLSFTAEAKL
510 520 530 540 550
DGQRGQLHIR LDGPEGKDDG GGRWVYADNG TKVWVRLFSR HLEDMTDKYP
560 570 580 590 600
DICHLALDLL SRPLATERPP FPAVSSRPFS RVIDLLHINN ITSVVMDTEI
610 620 630 640 650
VALDKDTGNF RTFQELSNRA KKDVKMEEIK VIVGVFAFDL MVLNDVSLLD
660 670 680 690 700
VPFSHRRHLL HSLLPPFAPN SNEVGHPVAR FTHVEYIDSV HLTDPEAELQ
710 720 730 740 750
AFFERVVEKK CEGLMVKLLE NGEGLAGEEA TEDSLGQEGG LEVKSEQKNG
760 770 780 790 800
SKSKRQPLPA TYEPDQRSQG WLKVKKDYLE GLGDSLDLVP IGAWWGQGRK
810 820 830 840 850
AGWWSPILLA CHNPDSGALE AVCKCMSGFS DAFYKDLSKR YPAEGMPSKC
860 870 880 890 900
SKIAPIGFVN TNGLIPDVWF EPSEVWEIKG ADITLSPVYP AASSHLGSER
910 920 930 940
GLSVRFPRFI RMRDDKTWED AMTSDQLADM YRRQIKEGEK TTKN
Length:944
Mass (Da):104,542
Last modified:June 28, 2011 - v1
Checksum:i5ADF7C7C76AE2B29
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAEY01000003 Genomic DNA. Translation: EAL23187.1.
RefSeqiXP_777834.1. XM_772741.1.

Genome annotation databases

GeneIDi4933794.
KEGGicnb:CNBA5310.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAEY01000003 Genomic DNA. Translation: EAL23187.1 .
RefSeqi XP_777834.1. XM_772741.1.

3D structure databases

ProteinModelPortali F5HGK7.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 4933794.
KEGGi cnb:CNBA5310.

Phylogenomic databases

KOi K10747.
OrthoDBi EOG7TXKRG.

Family and domain databases

Gene3Di 1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans."
    Loftus B.J., Fung E., Roncaglia P., Rowley D., Amedeo P., Bruno D., Vamathevan J., Miranda M., Anderson I.J., Fraser J.A., Allen J.E., Bosdet I.E., Brent M.R., Chiu R., Doering T.L., Donlin M.J., D'Souza C.A., Fox D.S.
    , Grinberg V., Fu J., Fukushima M., Haas B.J., Huang J.C., Janbon G., Jones S.J., Koo H.L., Krzywinski M.I., Kwon-Chung J.K., Lengeler K.B., Maiti R., Marra M.A., Marra R.E., Mathewson C.A., Mitchell T.G., Pertea M., Riggs F.R., Salzberg S.L., Schein J.E., Shvartsbeyn A., Shin H., Shumway M., Specht C.A., Suh B.B., Tenney A., Utterback T.R., Wickes B.L., Wortman J.R., Wye N.H., Kronstad J.W., Lodge J.K., Heitman J., Davis R.W., Fraser C.M., Hyman R.W.
    Science 307:1321-1324(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: B-3501AImported.

Entry informationi

Entry nameiF5HGK7_CRYNB
AccessioniPrimary (citable) accession number: F5HGK7
Entry historyi
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: November 26, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3