F5HGK7 (F5HGK7_CRYNB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL EAL23187.1

Gene names

Ordered Locus Names:

CNBA5310

Organism

Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) (Filobasidiella neoformans) [Complete proteome]

Taxonomic identifier

283643 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Fungi › Dikarya › Basidiomycota › Agaricomycotina › Tremellomycetes › Tremellales › Tremellaceae › Filobasidiella › Filobasidiella/Cryptococcus neoformans species complex › Cryptococcus neoformans › Cryptococcus neoformans var. neoformans

Protein attributes

Sequence length	944 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F5HGK7 [UniParc]. Last modified June 28, 2011. Version 1. Checksum: 5ADF7C7C76AE2B29	FASTA	944	104,542
	10 20 30 40 50 60 MPADSKVKRG AKPQATPITP PSKKFKQAAV TQQRPISSFF HSPVKSSIKG KEVIIIEDSD 70 80 90 100 110 120 SDDYPESSTQ AAIAHDGNGD VESSRNHVLQ LPEENQISSL SCVKEKDGHG MASTSKVFHE 130 140 150 160 170 180 RSKTTPNGTA ISSRTEGQSD RVHYFSRKSQ RTITGDEPVP PSSITTCASE DSVQNIDFDR 190 200 210 220 230 240 DPLAFDPSRV IATSWPKGRL PYSILVSVYV QLSSTKSRLA IVRILTNFLH LLMHTSPPDL 250 260 270 280 290 300 TPCLYLLSNH LTPSYIHCDL GIGSSILSKS IQEISGLQAR DLKHLWQKYG DPGDVAFEAK 310 320 330 340 350 360 NKLRTLVQPA PLLAGEVYDK LLEIAKVKGS NSGKIKNELV RKLLIRAKGE EVRFLVRSIV 370 380 390 400 410 420 GNLRIGAVRL TLLTALARAT TITRLPADLK QSIIPLPRAT ANDGRNDKRS VITKAPPDVA 430 440 450 460 470 480 RDSAETLCLD AIRIVRKVYV RHPNYEDLVA GLKEGVESLE DKVPVSVGIP LSPMLGSITR 490 500 510 520 530 540 SLNEVFTRLG HLSFTAEAKL DGQRGQLHIR LDGPEGKDDG GGRWVYADNG TKVWVRLFSR 550 560 570 580 590 600 HLEDMTDKYP DICHLALDLL SRPLATERPP FPAVSSRPFS RVIDLLHINN ITSVVMDTEI 610 620 630 640 650 660 VALDKDTGNF RTFQELSNRA KKDVKMEEIK VIVGVFAFDL MVLNDVSLLD VPFSHRRHLL 670 680 690 700 710 720 HSLLPPFAPN SNEVGHPVAR FTHVEYIDSV HLTDPEAELQ AFFERVVEKK CEGLMVKLLE 730 740 750 760 770 780 NGEGLAGEEA TEDSLGQEGG LEVKSEQKNG SKSKRQPLPA TYEPDQRSQG WLKVKKDYLE 790 800 810 820 830 840 GLGDSLDLVP IGAWWGQGRK AGWWSPILLA CHNPDSGALE AVCKCMSGFS DAFYKDLSKR 850 860 870 880 890 900 YPAEGMPSKC SKIAPIGFVN TNGLIPDVWF EPSEVWEIKG ADITLSPVYP AASSHLGSER 910 920 930 940 GLSVRFPRFI RMRDDKTWED AMTSDQLADM YRRQIKEGEK TTKN

References

[1]

"The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans." Loftus B.J., Fung E., Roncaglia P., Rowley D., Amedeo P., Bruno D., Vamathevan J., Miranda M., Anderson I.J., Fraser J.A., Allen J.E., Bosdet I.E., Brent M.R., Chiu R., Doering T.L., Donlin M.J., D'Souza C.A., Fox D.S. , Grinberg V., Fu J., Fukushima M., Haas B.J., Huang J.C., Janbon G., Jones S.J.M., Koo H.L., Krzywinski M.I., Kwon-Chung K.J., Lengeler K.B., Maiti R., Marra M.A., Marra R.E., Mathewson C.A., Mitchell T.G., Pertea M., Riggs F.R., Salzberg S.L., Schein J.E., Shvartsbeyn A., Shin H., Shumway M., Specht C.A., Suh B.B., Tenney A., Utterback T.R., Wickes B.L., Wortman J.R., Wye N.H., Kronstad J.W., Lodge J.K., Heitman J., Davis R.W., Fraser C.M., Hyman R.W. Science 307:1321-1324(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: B-3501A.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AAEY01000003 Genomic DNA. Translation: EAL23187.1.
RefSeq	XP_777834.1. XM_772741.1.
3D structure databases
ProteinModelPortal	F5HGK7.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4933794.
KEGG	cnb:CNBA5310.
Phylogenomic databases
KO	K10747.
Family and domain databases
Gene3D	1.10.3260.10. 1 hit. 2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012308. DNA_ligase_ATP-dep_N. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. PF04675. DNA_ligase_A_N. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit. SSF117018. SSF117018. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F5HGK7_CRYNB

Accession

Primary (citable) accession number: F5HGK7

Entry history

Integrated into UniProtKB/TrEMBL:	June 28, 2011
Last sequence update:	June 28, 2011
Last modified:	March 6, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)