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Protein

Membrane protein UL20

Gene

UL20

Organism
Human cytomegalovirus (strain Merlin) (HHV-5) (Human herpesvirus 5)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
Membrane protein UL20
Gene namesi
Name:UL20
OrganismiHuman cytomegalovirus (strain Merlin) (HHV-5) (Human herpesvirus 5)
Taxonomic identifieri295027 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageHerpesviralesHerpesviridaeBetaherpesvirinaeCytomegalovirus
Virus hostiHomo sapiens (Human) [TaxID: 9606]
Proteomesi
  • UP000000938 Componenti: Genome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini26 – 223LumenalSequence analysisAdd BLAST198
Transmembranei224 – 244HelicalSequence analysisAdd BLAST21
Topological domaini245 – 338CytoplasmicSequence analysisAdd BLAST94

GO - Cellular componenti

Keywords - Cellular componenti

Host endoplasmic reticulum, Host membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004182461 – 338Membrane protein UL20Add BLAST338

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Glycosylationi27N-linked (GlcNAc...) asparagine; by hostSequence analysis1
Glycosylationi54N-linked (GlcNAc...) asparagine; by hostSequence analysis1
Glycosylationi57N-linked (GlcNAc...) asparagine; by hostSequence analysis1
Glycosylationi68N-linked (GlcNAc...) asparagine; by hostSequence analysis1
Glycosylationi73N-linked (GlcNAc...) asparagine; by hostSequence analysis1
Glycosylationi79N-linked (GlcNAc...) asparagine; by hostSequence analysis1
Glycosylationi84N-linked (GlcNAc...) asparagine; by hostSequence analysis1
Glycosylationi108N-linked (GlcNAc...) asparagine; by hostSequence analysis1
Glycosylationi119N-linked (GlcNAc...) asparagine; by hostSequence analysis1
Glycosylationi143N-linked (GlcNAc...) asparagine; by hostSequence analysis1
Glycosylationi171N-linked (GlcNAc...) asparagine; by hostSequence analysis1
Glycosylationi178N-linked (GlcNAc...) asparagine; by hostSequence analysis1

Keywords - PTMi

Glycoprotein

Proteomic databases

PRIDEiF5H9Z4

Structurei

3D structure databases

SMRiF5H9Z4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi267 – 273Poly-Glu7
Compositional biasi306 – 329Pro-richAdd BLAST24

Sequence similaritiesi

Belongs to the HHV-5 UL20 protein family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

OrthoDBiVOG090000NI

Family and domain databases

InterProiView protein in InterPro
IPR035142 UL20
PfamiView protein in Pfam
PF17582 UL20, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD045802 PD045802, 1 hit

Sequencei

Sequence statusi: Complete.

F5H9Z4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLGIRAMLVM LDYYWIQLIT NNGTRSNNTD TIFVSLLTGP NGVTRTAIGG
60 70 80 90 100
LYSNYTNLTG AFGFTSTNMS ATNSSAEDNW SVTNLTESCI NRGESYVTTI
110 120 130 140 150
WLLDCTKNDT YWYYGNAYNH TCEGTISGYL LGMCKLWKSW VNNITSYNTV
160 170 180 190 200
RVESLGNETR CMLLPRQYTL NATVEWYNKS EGDVPEEFMD YVILTPLAVL
210 220 230 240 250
TCGLQEAYIL DKGRRYMYLF SVSCVGITGT VSIILVSLSL LILICYYRCG
260 270 280 290 300
RLLICPRGFE LLPEFTEEEE EKEKLLTHND IEVQVPIRTR RLLVPWIRES
310 320 330
KMWVLPPPLP PRPPHLIEFP PSPPPSPGPM HMVVCMPA
Length:338
Mass (Da):38,330
Last modified:June 28, 2011 - v1
Checksum:iA7FF32248B36C116
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY446894 Genomic DNA Translation: AAR31585.1
RefSeqiYP_081479.1, NC_006273.2

Genome annotation databases

GeneIDi3077434
KEGGivg:3077434

Similar proteinsi

Entry informationi

Entry nameiUL20_HCMVM
AccessioniPrimary (citable) accession number: F5H9Z4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 11, 2012
Last sequence update: June 28, 2011
Last modified: May 23, 2018
This is version 15 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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