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F5H9A8

- F5H9A8_CRYNB

UniProt

F5H9A8 - F5H9A8_CRYNB

Protein
Submitted name:

Putative uncharacterized protein

Gene

CNBD4680

Organism
Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) (Filobasidiella neoformans)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 16 (01 Oct 2014)
      Sequence version 1 (28 Jun 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. RNA binding Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized proteinImported
    Gene namesi
    Ordered Locus Names:CNBD4680Imported
    OrganismiCryptococcus neoformans var. neoformans serotype D (strain B-3501A) (Filobasidiella neoformans)Imported
    Taxonomic identifieri283643 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaAgaricomycotinaTremellomycetesTremellalesTremellaceaeFilobasidiellaFilobasidiella/Cryptococcus neoformans species complex
    ProteomesiUP000001435: Chromosome 4

    Subcellular locationi

    GO - Cellular componenti

    1. exosome (RNase complex) Source: InterPro

    Structurei

    3D structure databases

    ProteinModelPortaliF5H9A8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK07573.
    OrthoDBiEOG74BK39.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR019495. EXOSC1.
    IPR012340. NA-bd_OB-fold.
    IPR022967. RNA-binding_domain_S1.
    [Graphical view]
    PfamiPF10447. EXOSC1. 1 hit.
    [Graphical view]
    SMARTiSM00316. S1. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    F5H9A8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSSPSLLLPG QPLPAQLITP PLPKCGKGCY ERNGQILASV VGRPRRDGAV    50
    VSVIGREETV GTVDVDSIVI GVISRLTPQQ AHMTLTTLSD RPLPESSEDF 100
    TGLIRIADIR LTERDKVKMG ECFRLGDIVK AKVLSLGDAR SYYLSTAADE 150
    LGVVYAKSEA GNPLLPVSYQ EMEDEVTGKK EKRKVAKPEG I 191
    Length:191
    Mass (Da):20,632
    Last modified:June 28, 2011 - v1
    Checksum:i9955A308E1A4F92B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AAEY01000021 Genomic DNA. Translation: EAL21092.1.
    RefSeqiXP_775739.1. XM_770646.1.

    Genome annotation databases

    GeneIDi4935857.
    KEGGicnb:CNBD4680.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AAEY01000021 Genomic DNA. Translation: EAL21092.1 .
    RefSeqi XP_775739.1. XM_770646.1.

    3D structure databases

    ProteinModelPortali F5H9A8.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 4935857.
    KEGGi cnb:CNBD4680.

    Phylogenomic databases

    KOi K07573.
    OrthoDBi EOG74BK39.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR019495. EXOSC1.
    IPR012340. NA-bd_OB-fold.
    IPR022967. RNA-binding_domain_S1.
    [Graphical view ]
    Pfami PF10447. EXOSC1. 1 hit.
    [Graphical view ]
    SMARTi SM00316. S1. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans."
      Loftus B.J., Fung E., Roncaglia P., Rowley D., Amedeo P., Bruno D., Vamathevan J., Miranda M., Anderson I.J., Fraser J.A., Allen J.E., Bosdet I.E., Brent M.R., Chiu R., Doering T.L., Donlin M.J., D'Souza C.A., Fox D.S.
      , Grinberg V., Fu J., Fukushima M., Haas B.J., Huang J.C., Janbon G., Jones S.J.M., Koo H.L., Krzywinski M.I., Kwon-Chung K.J., Lengeler K.B., Maiti R., Marra M.A., Marra R.E., Mathewson C.A., Mitchell T.G., Pertea M., Riggs F.R., Salzberg S.L., Schein J.E., Shvartsbeyn A., Shin H., Shumway M., Specht C.A., Suh B.B., Tenney A., Utterback T.R., Wickes B.L., Wortman J.R., Wye N.H., Kronstad J.W., Lodge J.K., Heitman J., Davis R.W., Fraser C.M., Hyman R.W.
      Science 307:1321-1324(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: B-3501AImported.

    Entry informationi

    Entry nameiF5H9A8_CRYNB
    AccessioniPrimary (citable) accession number: F5H9A8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 28, 2011
    Last sequence update: June 28, 2011
    Last modified: October 1, 2014
    This is version 16 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3