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F5H9A8

- F5H9A8_CRYNB

UniProt

F5H9A8 - F5H9A8_CRYNB

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Protein
Submitted name: Putative uncharacterized protein
Gene
CNBD4680
Organism
Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) (Filobasidiella neoformans)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. RNA binding Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Ordered Locus Names:CNBD4680Imported
OrganismiCryptococcus neoformans var. neoformans serotype D (strain B-3501A) (Filobasidiella neoformans)
Taxonomic identifieri283643 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaAgaricomycotinaTremellomycetesTremellalesTremellaceaeFilobasidiellaFilobasidiella/Cryptococcus neoformans species complex
ProteomesiUP000001435: Chromosome 4

Subcellular locationi

GO - Cellular componenti

  1. exosome (RNase complex) Source: InterPro
Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliF5H9A8.

Family & Domainsi

Phylogenomic databases

KOiK07573.
OrthoDBiEOG74BK39.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR019495. EXOSC1.
IPR012340. NA-bd_OB-fold.
IPR022967. RNA-binding_domain_S1.
[Graphical view]
PfamiPF10447. EXOSC1. 1 hit.
[Graphical view]
SMARTiSM00316. S1. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.

Sequencei

Sequence statusi: Complete.

F5H9A8-1 [UniParc]FASTAAdd to Basket

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MSSPSLLLPG QPLPAQLITP PLPKCGKGCY ERNGQILASV VGRPRRDGAV    50
VSVIGREETV GTVDVDSIVI GVISRLTPQQ AHMTLTTLSD RPLPESSEDF 100
TGLIRIADIR LTERDKVKMG ECFRLGDIVK AKVLSLGDAR SYYLSTAADE 150
LGVVYAKSEA GNPLLPVSYQ EMEDEVTGKK EKRKVAKPEG I 191
Length:191
Mass (Da):20,632
Last modified:June 28, 2011 - v1
Checksum:i9955A308E1A4F92B
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AAEY01000021 Genomic DNA. Translation: EAL21092.1.
RefSeqiXP_775739.1. XM_770646.1.

Genome annotation databases

GeneIDi4935857.
KEGGicnb:CNBD4680.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AAEY01000021 Genomic DNA. Translation: EAL21092.1 .
RefSeqi XP_775739.1. XM_770646.1.

3D structure databases

ProteinModelPortali F5H9A8.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 4935857.
KEGGi cnb:CNBD4680.

Phylogenomic databases

KOi K07573.
OrthoDBi EOG74BK39.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR019495. EXOSC1.
IPR012340. NA-bd_OB-fold.
IPR022967. RNA-binding_domain_S1.
[Graphical view ]
Pfami PF10447. EXOSC1. 1 hit.
[Graphical view ]
SMARTi SM00316. S1. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans."
    Loftus B.J., Fung E., Roncaglia P., Rowley D., Amedeo P., Bruno D., Vamathevan J., Miranda M., Anderson I.J., Fraser J.A., Allen J.E., Bosdet I.E., Brent M.R., Chiu R., Doering T.L., Donlin M.J., D'Souza C.A., Fox D.S.
    , Grinberg V., Fu J., Fukushima M., Haas B.J., Huang J.C., Janbon G., Jones S.J.M., Koo H.L., Krzywinski M.I., Kwon-Chung K.J., Lengeler K.B., Maiti R., Marra M.A., Marra R.E., Mathewson C.A., Mitchell T.G., Pertea M., Riggs F.R., Salzberg S.L., Schein J.E., Shvartsbeyn A., Shin H., Shumway M., Specht C.A., Suh B.B., Tenney A., Utterback T.R., Wickes B.L., Wortman J.R., Wye N.H., Kronstad J.W., Lodge J.K., Heitman J., Davis R.W., Fraser C.M., Hyman R.W.
    Science 307:1321-1324(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: B-3501A.

Entry informationi

Entry nameiF5H9A8_CRYNB
AccessioniPrimary (citable) accession number: F5H9A8
Entry historyi
Integrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: November 13, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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