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F5H7B7

- F5H7B7_HUMAN

UniProt

F5H7B7 - F5H7B7_HUMAN

Protein
Submitted name:

ATP-binding cassette sub-family A member 13

Gene

ABCA13

Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 25 (01 Oct 2014)
      Sequence version 1 (28 Jun 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATPase activity Source: InterPro
    2. ATP binding Source: UniProtKB-KW

    Keywords - Ligandi

    ATP-bindingUniRule annotation, Nucleotide-binding

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-binding cassette sub-family A member 13Imported
    Gene namesi
    Name:ABCA13Imported
    OrganismiHomo sapiens (Human)Imported
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome 7

    Organism-specific databases

    HGNCiHGNC:14638. ABCA13.

    PTM / Processingi

    Proteomic databases

    PRIDEiF5H7B7.

    Expressioni

    Gene expression databases

    ArrayExpressiF5H7B7.
    BgeeiF5H7B7.

    Structurei

    3D structure databases

    ProteinModelPortaliF5H7B7.
    SMRiF5H7B7. Positions 378-673.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Family and domain databases

    Gene3Di3.40.50.300. 1 hit.
    InterProiIPR003593. AAA+_ATPase.
    IPR026082. ABC_A.
    IPR003439. ABC_transporter-like.
    IPR027417. P-loop_NTPase.
    [Graphical view]
    PANTHERiPTHR19229. PTHR19229. 1 hit.
    PfamiPF00005. ABC_tran. 1 hit.
    [Graphical view]
    SMARTiSM00382. AAA. 1 hit.
    [Graphical view]
    SUPFAMiSSF52540. SSF52540. 1 hit.
    PROSITEiPS50893. ABC_TRANSPORTER_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    F5H7B7-1 [UniParc]FASTAAdd to Basket

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    MGLFMVRPLA TEYPPLRLTP GHYQRAETYF FRKNSSCWRT DPFSHPEFQD    50
    SCGCLKCPNR SASAPYLTNH LGHTLLNLSG FNMEEYLLAP SEKPRLGGWS 100
    FGLKIPSEAG GANGNISKPP TLAKVWYNQK GFHSLPSYLN HLNNLILWQH 150
    LPPTVDWRQY GITLYSHPYG GALLNKDKIL ESIRQCGVAL CIVLGFSILS 200
    ASIGSSVVRD RVIGAKRLQH ISGLGYRMYW FTNFLYDMLF YLVSVCLCVA 250
    VIVAFQLTAF TFRKNLAATA LLLSLFGYAT LPWMYLMSRI FSSSDVAFIS 300
    YVSLNFIFGL CTMLITIMPR LLAIISKAKN LQNIYDVLKW VFTIFPQFCL 350
    GQGLVELCYN QIKYDLTHNF GIDSYVSPFE MNFLGWIFVQ LASQGTVLLL 400
    LRVLLHWDLL RWPRGHSTLQ GTVKSSKDTD VEKEEKRVFE GRTNGDILVL 450
    YNLSKHYRRF FQNIIAVQDI SLGIPKGECF GLLGVNGAGK STTFKMLNGE 500
    VSLTSGHAII RTPMGDAVDL SSAGTAGVLI GYCPQQDALD ELLTGWEHLY 550
    YYCSLRGIPR QCIPEVAGDL IRRLHLEAHA DKPVATYSGG TKRKLSTALA 600
    LVGKPDILLL DEPSSGMDPC SKRYLWQTIM KEVREGCAAV LTSHSMEECE 650
    ALCTRLAIMV NGSFKCLGSP QHIKNRFGDG YTVKVWLCKE ANQHCTVSDH 700
    LKLYFPGIQF KGQHLNLLEY HVPKRWGCLA DLFKVIENNK TFLNIKHYSI 750
    NQTTLEQVFI NFASEQQQTL QSTLDPSTDS HHTHHLPI 788
    Length:788
    Mass (Da):88,750
    Last modified:June 28, 2011 - v1
    Checksum:i6E3DE3C48210CF68
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC073424 Genomic DNA. No translation available.
    AC073927 Genomic DNA. No translation available.
    AC091770 Genomic DNA. No translation available.
    AC095039 Genomic DNA. No translation available.
    AC232300 Genomic DNA. No translation available.
    AC232312 Genomic DNA. No translation available.
    FJ770081 Genomic DNA. No translation available.
    KF458461 Genomic DNA. No translation available.
    KF511036 Genomic DNA. No translation available.

    Genome annotation databases

    EnsembliENST00000544596; ENSP00000442634; ENSG00000179869.
    UCSCiuc010kyu.1. human.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC073424 Genomic DNA. No translation available.
    AC073927 Genomic DNA. No translation available.
    AC091770 Genomic DNA. No translation available.
    AC095039 Genomic DNA. No translation available.
    AC232300 Genomic DNA. No translation available.
    AC232312 Genomic DNA. No translation available.
    FJ770081 Genomic DNA. No translation available.
    KF458461 Genomic DNA. No translation available.
    KF511036 Genomic DNA. No translation available.

    3D structure databases

    ProteinModelPortali F5H7B7.
    SMRi F5H7B7. Positions 378-673.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi F5H7B7.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000544596 ; ENSP00000442634 ; ENSG00000179869 .
    UCSCi uc010kyu.1. human.

    Organism-specific databases

    HGNCi HGNC:14638. ABCA13.
    GenAtlasi Search...

    Miscellaneous databases

    ChiTaRSi ABCA13. human.
    NextBioi 35509349.

    Gene expression databases

    ArrayExpressi F5H7B7.
    Bgeei F5H7B7.

    Family and domain databases

    Gene3Di 3.40.50.300. 1 hit.
    InterProi IPR003593. AAA+_ATPase.
    IPR026082. ABC_A.
    IPR003439. ABC_transporter-like.
    IPR027417. P-loop_NTPase.
    [Graphical view ]
    PANTHERi PTHR19229. PTHR19229. 1 hit.
    Pfami PF00005. ABC_tran. 1 hit.
    [Graphical view ]
    SMARTi SM00382. AAA. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52540. SSF52540. 1 hit.
    PROSITEi PS50893. ABC_TRANSPORTER_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The DNA sequence of human chromosome 7."
      Hillier L.W., Fulton R.S., Fulton L.A., Graves T.A., Pepin K.H., Wagner-McPherson C., Layman D., Maas J., Jaeger S., Walker R., Wylie K., Sekhon M., Becker M.C., O'Laughlin M.D., Schaller M.E., Fewell G.A., Delehaunty K.D., Miner T.L.
      , Nash W.E., Cordes M., Du H., Sun H., Edwards J., Bradshaw-Cordum H., Ali J., Andrews S., Isak A., Vanbrunt A., Nguyen C., Du F., Lamar B., Courtney L., Kalicki J., Ozersky P., Bielicki L., Scott K., Holmes A., Harkins R., Harris A., Strong C.M., Hou S., Tomlinson C., Dauphin-Kohlberg S., Kozlowicz-Reilly A., Leonard S., Rohlfing T., Rock S.M., Tin-Wollam A.-M., Abbott A., Minx P., Maupin R., Strowmatt C., Latreille P., Miller N., Johnson D., Murray J., Woessner J.P., Wendl M.C., Yang S.-P., Schultz B.R., Wallis J.W., Spieth J., Bieri T.A., Nelson J.O., Berkowicz N., Wohldmann P.E., Cook L.L., Hickenbotham M.T., Eldred J., Williams D., Bedell J.A., Mardis E.R., Clifton S.W., Chissoe S.L., Marra M.A., Raymond C., Haugen E., Gillett W., Zhou Y., James R., Phelps K., Iadanoto S., Bubb K., Simms E., Levy R., Clendenning J., Kaul R., Kent W.J., Furey T.S., Baertsch R.A., Brent M.R., Keibler E., Flicek P., Bork P., Suyama M., Bailey J.A., Portnoy M.E., Torrents D., Chinwalla A.T., Gish W.R., Eddy S.R., McPherson J.D., Olson M.V., Eichler E.E., Green E.D., Waterston R.H., Wilson R.K.
      Nature 424:157-164(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    2. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.

    Entry informationi

    Entry nameiF5H7B7_HUMAN
    AccessioniPrimary (citable) accession number: F5H7B7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 28, 2011
    Last sequence update: June 28, 2011
    Last modified: October 1, 2014
    This is version 25 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3