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Protein

Reticulon

Gene

RTN3

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
ReticulonUniRule annotation
Gene namesi
Name:RTN3Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 11

Organism-specific databases

EuPathDBiHostDB:ENSG00000133318.13.
HGNCiHGNC:10469. RTN3.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei88 – 117HelicalUniRule annotationAdd BLAST30

Keywords - Cellular componenti

Membrane

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000133318.

PTM / Processingi

Proteomic databases

MaxQBiF5H617.
PaxDbiF5H617.
PeptideAtlasiF5H617.
PRIDEiF5H617.

Expressioni

Gene expression databases

BgeeiENSG00000133318.
ExpressionAtlasiF5H617. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliF5H617.
SMRiF5H617.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini74 – 185ReticulonInterPro annotationAdd BLAST112

Keywords - Domaini

Transmembrane, Transmembrane helixUniRule annotation

Phylogenomic databases

eggNOGiKOG1792. Eukaryota.
ENOG410XPKH. LUCA.
GeneTreeiENSGT00390000009934.

Family and domain databases

InterProiView protein in InterPro
IPR003388. Reticulon.
PfamiView protein in Pfam
PF02453. Reticulon. 1 hit.
PROSITEiView protein in PROSITE
PS50845. RETICULON. 1 hit.

Sequencei

Sequence statusi: Fragment.

F5H617-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAEPSAATQS HSISSSSFGA EPSAPGGGGS PGACPALGTK SCSSSCAESS
60 70 80 90 100
LGSHFVPHPV SLLSFNLRIK IKRMHDLIFW RDVKKTGFVF GTTLIMLLSL
110 120 130 140 150
AAFSVISVVS YLILALLSVT ISFRIYKSVI QAVQKSEEGH PFKAYLDVDI
160 170 180
TLSSEAFHNY MNAAMVHINR ALKLIIRLFL VEDLV
Length:185
Mass (Da):19,919
Last modified:June 28, 2011 - v1
Checksum:i47A047A70B8640D3
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei185Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP000753 Genomic DNA. No translation available.
AP006289 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000542238; ENSP00000437971; ENSG00000133318.
UCSCiuc058crk.1. human.

Similar proteinsi

Entry informationi

Entry nameiF5H617_HUMAN
AccessioniPrimary (citable) accession number: F5H617
Entry historyiIntegrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: October 25, 2017
This is version 50 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.UniRule annotation
The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported