F5H3W1 (F5H3W1_HUMAN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Podocalyxin Ensembl ENSP00000439063

Gene names

Name:

PODXL Ensembl ENSP00000439063

Organism

Homo sapiens (Human) [Reference proteome] Ensembl ENSP00000439063

Taxonomic identifier

9606 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Primates › Haplorrhini › Simiiformes › Catarrhini › Hominoidea › Hominidae › Homininae › Homo

Protein attributes

Sequence length	516 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSP00000439063

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

	Sequence		Length	Mass (Da)
	F5H3W1 [UniParc]. Last modified June 28, 2011. Version 1. Checksum: 421391D562A7F76E	FASTA	516	54,412
	10 20 30 40 50 60 MRCALALSAL LLLLSTSPSP SQNATQTTTD SSNKTAPTPA SSVTIMATDT AQQSTVPTSK 70 80 90 100 110 120 ANEILASVKA TTLGVSSDSP GTTTLAQQVS GPVNTTVARG GGSGNPTTTI ESPKSTKSAD 130 140 150 160 170 180 TTTVATSTAT AKPNTTSSQN GAEDTTNSGG KSSHSVTTDL TSTKAEHLTT PHPTSPLSPR 190 200 210 220 230 240 QPTSTHPVAT PTSSGHDHLM KISSSSSTVA IPGYTFTSPG MTTTLPSSVI SQRTQQTSSQ 250 260 270 280 290 300 MPASSTAPSS QETVQPTSPA TALRTPTLPE TMSSSPTAAS TTHRYPKTPS PTVAHESNWA 310 320 330 340 350 360 KCEDLETQTQ SEKQLVLNLT GNTLCAGGAS DEKLISLICR AVKATFNPAQ DKCGIRLASV 370 380 390 400 410 420 PGSQTVVVKE ITIHTKLPAK DVYERLKDKW DELKEAGVSD MKLGDQGPPE EAEDRFSMPL 430 440 450 460 470 480 IITIVCMASF LLLVAALYGC CHQRLSQRKD QQRLTEELQT VENGYHDNPT LEVMETSSEM 490 500 510 QEKKVVSLNG ELGDSWIVPL DNLTKDDLDE EEDTHL

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The DNA sequence of human chromosome 7." Hillier L.W., Fulton R.S., Fulton L.A., Graves T.A., Pepin K.H., Wagner-McPherson C., Layman D., Maas J., Jaeger S., Walker R., Wylie K., Sekhon M., Becker M.C., O'Laughlin M.D., Schaller M.E., Fewell G.A., Delehaunty K.D., Miner T.L. , Nash W.E., Cordes M., Du H., Sun H., Edwards J., Bradshaw-Cordum H., Ali J., Andrews S., Isak A., Vanbrunt A., Nguyen C., Du F., Lamar B., Courtney L., Kalicki J., Ozersky P., Bielicki L., Scott K., Holmes A., Harkins R., Harris A., Strong C.M., Hou S., Tomlinson C., Dauphin-Kohlberg S., Kozlowicz-Reilly A., Leonard S., Rohlfing T., Rock S.M., Tin-Wollam A.-M., Abbott A., Minx P., Maupin R., Strowmatt C., Latreille P., Miller N., Johnson D., Murray J., Woessner J.P., Wendl M.C., Yang S.-P., Schultz B.R., Wallis J.W., Spieth J., Bieri T.A., Nelson J.O., Berkowicz N., Wohldmann P.E., Cook L.L., Hickenbotham M.T., Eldred J., Williams D., Bedell J.A., Mardis E.R., Clifton S.W., Chissoe S.L., Marra M.A., Raymond C., Haugen E., Gillett W., Zhou Y., James R., Phelps K., Iadanoto S., Bubb K., Simms E., Levy R., Clendenning J., Kaul R., Kent W.J., Furey T.S., Baertsch R.A., Brent M.R., Keibler E., Flicek P., Bork P., Suyama M., Bailey J.A., Portnoy M.E., Torrents D., Chinwalla A.T., Gish W.R., Eddy S.R., McPherson J.D., Olson M.V., Eichler E.E., Green E.D., Waterston R.H., Wilson R.K. Nature 424:157-164(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]	Ensembl Submitted (JUL-2011) to UniProtKB Cited for: IDENTIFICATION.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AC008264 Genomic DNA. No translation available.
IPI	IPI01012180.
3D structure databases
ModBase	Search...
Proteomic databases
PRIDE	F5H3W1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENST00000544955; ENSP00000439063; ENSG00000128567.
Organism-specific databases
HGNC	HGNC:9171. PODXL.
GenAtlas	Search...
Gene expression databases
ArrayExpress	F5H3W1.
Bgee	F5H3W1.
Family and domain databases
InterPro	IPR013836. CD34/Podocalyxin. IPR017403. Podocalyxin-like_p1. [Graphical view]
Pfam	PF06365. CD34_antigen. 1 hit. [Graphical view]
PIRSF	PIRSF038143. Podocalyxin-like_p1. 1 hit.
ProtoNet	Search...
Other
ChiTaRS	PODXL. human.
NextBio	35508679.

Entry information

Entry name

F5H3W1_HUMAN

Accession

Primary (citable) accession number: F5H3W1

Entry history

Integrated into UniProtKB/TrEMBL:	June 28, 2011
Last sequence update:	June 28, 2011
Last modified:	April 3, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.