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Protein
Submitted name:

High mobility group protein HMGI-C

Gene

HMGA2

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
High mobility group protein HMGI-CImported
Gene namesi
Name:HMGA2Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 12

Organism-specific databases

EuPathDBiHostDB:ENSG00000149948.13.
HGNCiHGNC:5009. HMGA2.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000149948.

PTM / Processingi

Proteomic databases

MaxQBiF5H2A4.
PaxDbiF5H2A4.
PeptideAtlasiF5H2A4.
PRIDEiF5H2A4.

Expressioni

Gene expression databases

BgeeiENSG00000149948.
ExpressionAtlasiF5H2A4. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliF5H2A4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG410IZGR. Eukaryota.
ENOG410YWK3. LUCA.
GeneTreeiENSGT00730000111387.

Family and domain databases

InterProiView protein in InterPro
IPR017956. AT_hook_DNA-bd_motif.
IPR000116. HMGA.
IPR000637. HMGI/Y_DNA-bd_CS.
PfamiView protein in Pfam
PF02178. AT_hook. 3 hits.
PRINTSiPR00929. ATHOOK.
PR00930. HIGHMOBLTYIY.
SMARTiView protein in SMART
SM00384. AT_hook. 3 hits.
PROSITEiView protein in PROSITE
PS00354. HMGI_Y. 1 hit.

Sequencei

Sequence statusi: Complete.

F5H2A4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSARGEGAGQ PSTSAQGQPA APAPQKRGRG RPRKQQQEPT GEPSPKRPRG
60 70 80 90 100
RPKGSKNKSP SKAAQKKAEA TGEKRPRGRP RKWPQQVVQK KPAQVNVALP
110
GKDHPGNLIY LLFSKNAT
Length:118
Mass (Da):12,714
Last modified:June 28, 2011 - v1
Checksum:i05A17E34D52E0D8E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC090673 Genomic DNA. No translation available.
AC107308 Genomic DNA. No translation available.
RefSeqiNP_001287847.1. NM_001300918.1.
UniGeneiHs.505924.
Hs.666976.

Genome annotation databases

EnsembliENST00000393577; ENSP00000377205; ENSG00000149948.
GeneIDi8091.
UCSCiuc058qmd.1. human.

Similar proteinsi

Entry informationi

Entry nameiF5H2A4_HUMAN
AccessioniPrimary (citable) accession number: F5H2A4
Entry historyiIntegrated into UniProtKB/TrEMBL: June 28, 2011
Last sequence update: June 28, 2011
Last modified: October 25, 2017
This is version 47 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported